Pairwise Alignments

Query, 1035 a.a., heavy metal efflux pump, cobalt-zinc-cadmium from Dechlorosoma suillum PS

Subject, 1080 a.a., AcrB-family cation/multidrug efflux pump from Caulobacter crescentus NA1000 Δfur

 Score =  712 bits (1839), Expect = 0.0
 Identities = 403/1067 (37%), Positives = 630/1067 (59%), Gaps = 45/1067 (4%)

Query: 1    MLERLVTFALAQRLFVIVGVLVLIAVGGYAVVNLPIEAFPDVQDVQVNIVTQAPGLAPEE 60
            M+ R++  ++  R  VI  V ++ A+G Y ++ LPI+A PD+ + QV I T  P LAP E
Sbjct: 1    MIGRILDLSVRARWAVIAVVALVAALGVYNLIRLPIDAVPDITNKQVQINTVVPALAPAE 60

Query: 61   VERSISLPIEREMNGVPRMTQLRSVSITGLSIVTLTFADNTDDYFARQQVTEKLQNV--V 118
            VE+ ++ P+E  M+G+P +   RS+S  G S VT+ F + TD YFARQQV+E+L +V   
Sbjct: 61   VEKLVTFPVETAMSGIPGLESTRSISRNGFSQVTIVFQEKTDLYFARQQVSERLTSVGKA 120

Query: 119  LPPGAQPGLAPLTTAVGEI--YRYVFEAPADMPLH------------------------- 151
            LP GAQP + P+++ +GE+  +   ++ P                               
Sbjct: 121  LPEGAQPAMGPISSGLGEVLMWTVAYDHPGGRGARVKDGAPGWQSDGAYLTITGERLTDT 180

Query: 152  -----EVRALQDWVVRPALRRVTGVADVVSFGGAVKEYQVRIDPARLRKFAVSIDQVSQA 206
                  +R +QDW+VRP +R V GVA V S GG  K++ V+ DPAR+  + VS  Q+++A
Sbjct: 181  TAQAAYLREVQDWIVRPQMRGVAGVAGVDSIGGYEKQFAVQPDPARMASYGVSFSQLAKA 240

Query: 207  LASNNANAGGGIMRRGDEALVVRSIGLLSKVDDIARVTVAVRDGKPILVGDVARVEIGPR 266
            L + N   G   M RG EA +VR+   +  +D+IA  TVA R G PI V D+A +++G  
Sbjct: 241  LEAANIAVGANFMERGGEAYLVRADARVRNIDEIANATVATRAGMPIRVRDLATLKVGGG 300

Query: 267  TRSGIVSFNERDDVVQGIVQMSKGQNAIKVSAALKEEMARVGERLPAGVRLVPIYDRIEL 326
             R+G  S N  ++VV G V M  G+N+  V+ A  E +  + + LP GVR+   YDR +L
Sbjct: 301  LRTGAASEN-GEEVVVGTVLMLTGENSRAVAGASAERLKAIAKTLPPGVRVQITYDRSKL 359

Query: 327  VKHTVHTVSENLLVGAVLVVGILILFLRSWFAAAVVAVVIPLSLLTAFVMMHTKGVAANL 386
            V  T+ TV +NL+ GA+LV+ +L + L ++ AA + A+VIPLS+L   + M+  GV+ NL
Sbjct: 360  VNATIKTVEKNLVEGALLVIAVLFVLLGNFRAALITALVIPLSMLMTAIGMNRLGVSGNL 419

Query: 387  ISLGAVDFGIIIDGAVVLVEALMVRLAMGEPEKNPLHGTLQWRMLTLKHTAIEMGHPIIF 446
            +SLGA+DFG+I+DGAV++VE  + RLA  + ++  L  T   R+   +  A EM  P ++
Sbjct: 420  MSLGALDFGLIVDGAVIIVENSLRRLAERQHQEGRLL-TSSERLHETREAAREMIAPTVY 478

Query: 447  SKAIIILAFLPIFTFERVEGKIFAPMAYTLSFAIIGAILLTLTLTPALTSFYLKQHNLAE 506
             +AII+L + P+ TF  VEGK F+PMA T+  A+  A +L+LT  PA+ +  ++   +AE
Sbjct: 479  GQAIILLVYAPLLTFTGVEGKTFSPMAITVMLALAAAFVLSLTFIPAMVALLIR-GKVAE 537

Query: 507  KHLDWMHRLQGRYRDLMQWADGRRRQIVVGSGLILALSLALVPHLGSEFLPKLDEGNIWL 566
            K +  +   +  Y  L++ A  R   ++  +  +  +++     LG EF P+LDE ++ +
Sbjct: 538  KEVALVRWAKVGYAPLLRKAVARPWPVIAAATGLFVVAMITFTFLGREFTPQLDEKDLAV 597

Query: 567  TVTLPPATNLAKTKEVEQEVRRILLSYPEVSKVIAHVGRPDDGTDPKGPNNMEILADLKP 626
                 P+T+L ++  +++++ R + ++PEV  V +  G  +  +DP  PN  +    LK 
Sbjct: 598  QALRIPSTSLEQSLRMQRQIERTIAAFPEVEFVYSKTGTAEVASDPMPPNASDSFIILKA 657

Query: 627  HNEW--RFPSKEALIADMSGKIRAIPGVPTNFSQVIEDNVQESISGVKGEIAVKIFGPDL 684
             +EW     SK  L+  M  K+  + G    FSQ I+    E I+GV+G++A+K++G DL
Sbjct: 658  QDEWPDSKQSKAQLVDRMERKLEGLTGNVYEFSQPIQMRFNELIAGVRGDVAIKVYGDDL 717

Query: 685  DILEDKAEQVVGVLGAIHGAADVAAIKVSGQTELDITLDRERMARYGISAQDVNATVQTA 744
              +   A+Q+ GVL  + GAADV   + SG   LD++LDR+ + R G++ ++V  T+  A
Sbjct: 718  AAMTASADQIAGVLRGVRGAADVKVEQTSGFPTLDVSLDRDAIGRLGLTVEEVADTLAVA 777

Query: 745  LAGSAVAVFYDGDRRFDIVVRLEKEYRDAVDDVADLPIALPHSDHPSLADPGTIPLAAIA 804
            + G A  + + GDRRF++VVRL +  R+ +D +  LP+ LPH    S     ++PL  +A
Sbjct: 778  MGGRASGLVFQGDRRFEVVVRLPEATRNDLDAIGALPVMLPHG--ASAGPRLSVPLRDVA 835

Query: 805  SVEVRQGPARIAREAGGRYVAVKANLLGRDQGSFVAEAMAKVKERVHLPNGYSMTWGGQF 864
                 +G  +++RE G R V V+AN+ G D GSFV+EA AKV  ++ LP G  + W GQF
Sbjct: 836  RFSFSEGLNQVSRENGKRRVVVQANVRGNDLGSFVSEAQAKVSAQIELPAGSWVEWSGQF 895

Query: 865  ENQQRATKRLAVIVPLSVLGIFVLLFWAFRSMPFALLVLGMVPFTWVGGILGLAAAGLHM 924
            EN + A  RL+++VPL  L IF LL+ A      AL V   +P    GG+ GLA  G+  
Sbjct: 896  ENLKAAQSRLSLVVPLCFLLIFALLYMALGGFAPALAVFSAIPLALAGGVFGLALRGIPF 955

Query: 925  SVSAAVGFIAVAGISVQNGVIMVEQFLEGVRNGQSVAVSVREGAVGRLRPILMTALMAGL 984
            SVSAAVGFIA++G++V NG++M+    + +  G ++  ++  GA+ RLRP++MT L+A L
Sbjct: 956  SVSAAVGFIALSGVAVLNGLVMMTAIRQRLAQGLALEQAIIAGAMERLRPVMMTGLVASL 1015

Query: 985  GLLPAALSHGIGSETQRPFAVVIVGGIVSATIFTLILLPLLFPALCR 1031
            G +P AL+   G+E QRP A V++GG+++AT  TL +L    PA+CR
Sbjct: 1016 GFVPMALATETGAEVQRPLATVVIGGLITATALTLFVL----PAICR 1058



 Score = 56.2 bits (134), Expect = 1e-11
 Identities = 80/353 (22%), Positives = 147/353 (41%), Gaps = 36/353 (10%)

Query: 165  LRRVTGVADV-VSFGGAVKEYQVRIDPARLRKFAVSIDQVSQALASNNANAGGGIMRRGD 223
            LR V G ADV V          V +D   + +  +++++V+  LA        G++ +GD
Sbjct: 731  LRGVRGAADVKVEQTSGFPTLDVSLDRDAIGRLGLTVEEVADTLAVAMGGRASGLVFQGD 790

Query: 224  ---EALVVRSIGLLSKVDDIARVTVAVRDGKP------ILVGDVARVEIGPRTRSGIVSF 274
               E +V       + +D I  + V +  G        + + DVAR              
Sbjct: 791  RRFEVVVRLPEATRNDLDAIGALPVMLPHGASAGPRLSVPLRDVARFSFSEGLNQVSREN 850

Query: 275  NERDDVVQGIVQMSKGQNAIKVSAALKEEMARVGER--LPAGVRLVPIYDRIELVKHTVH 332
             +R  VVQ  V+ +       + + + E  A+V  +  LPAG   V    + E +K    
Sbjct: 851  GKRRVVVQANVRGND------LGSFVSEAQAKVSAQIELPAG-SWVEWSGQFENLKAAQS 903

Query: 333  TVSENLLVGAVLVVGILILFLRSWFAAAVVAVVIPLSLLTAFVMMHTKGVAANLISLGAV 392
             +S  + +  +L+  +L + L  +  A  V   IPL+L      +  +G+  ++ +  AV
Sbjct: 904  RLSLVVPLCFLLIFALLYMALGGFAPALAVFSAIPLALAGGVFGLALRGIPFSVSA--AV 961

Query: 393  DF----GIIIDGAVVLVEALMVRLAMGEPEKNPLHGTLQWRMLTLKHTAIEMGHPIIFSK 448
             F    G+ +   +V++ A+  RLA G   +  +              A+E   P++ + 
Sbjct: 962  GFIALSGVAVLNGLVMMTAIRQRLAQGLALEQAIIAG-----------AMERLRPVMMTG 1010

Query: 449  AIIILAFLPIFTFERVEGKIFAPMAYTLSFAIIGAILLTLTLTPALTSFYLKQ 501
             +  L F+P+        ++  P+A  +   +I A  LTL + PA+  F L+Q
Sbjct: 1011 LVASLGFVPMALATETGAEVQRPLATVVIGGLITATALTLFVLPAICRFVLRQ 1063