Pairwise Alignments

Query, 326 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECRC62

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 6/157 (3%)

Query: 12  ILVVDDEPNIVSAVQRELASPPHGRYRYQVTGCTDPLQALAKARKQSFDAVISDYRMPDM 71
           ILVVDD+ +  + +Q  L       + Y V       QAL + R+Q FD V+ D RM +M
Sbjct: 8   ILVVDDDISHCTILQALLRG-----WGYNVALANSGRQALEQVREQVFDLVLCDVRMAEM 62

Query: 72  DGLEFLKELTLLQPECARLVLSGQTDMATLIRMVNETHIYRFIPKPWHDYYLKSSLAQAI 131
           DG+  LKE+  L P    L+++  + + T +  + +T    ++ KP     L+++L +A+
Sbjct: 63  DGIATLKEIKALNPAIPVLIMTAYSSVETAVEAL-KTGALDYLIKPLDFDNLQATLEKAL 121

Query: 132 GYHQTLRQHRELAAVVRQRQISVPPLPEGNMEQILIV 168
            +  ++          +   +   P  +  + +I +V
Sbjct: 122 AHTHSIDAETPAVTASQFGMVGKSPAMQHLLSEIALV 158



 Score = 40.8 bits (94), Expect = 6e-08
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 5/123 (4%)

Query: 185 HSEVDDLYLAIRAEVAHATT--PVLQEGKISVQVTPSARHALELVKNNTFSCIIADRKMP 242
           H  +D   L +  +++H T    +L+    +V +  S R ALE V+   F  ++ D +M 
Sbjct: 3   HDNID--ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMA 60

Query: 243 EMDGVELLQRFADLQPDCFRILISNEICEGDLIQAIGGANIFAFIQKPWSDFELKNSIAQ 302
           EMDG+  L+    L P    +LI       +            ++ KP     L+ ++ +
Sbjct: 61  EMDGIATLKEIKALNP-AIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEK 119

Query: 303 ALA 305
           ALA
Sbjct: 120 ALA 122