Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 332 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Variovorax sp. SCN45

 Score =  129 bits (325), Expect = 5e-35
 Identities = 87/223 (39%), Positives = 115/223 (51%), Gaps = 19/223 (8%)

Query: 7   PPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCL-----VSRVQAVFADAMIAHRL 61
           P    L  +YED  L +V+KPAGL+  P  G      L     +    A+   A I HRL
Sbjct: 99  PETMDLVTVYEDEHLRIVDKPAGLVVHPAPGHWSGTLLNGLLALDPKAALLPRAGIVHRL 158

Query: 62  DMDTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAV-----VAGVLQDKEGEVDLPLIVD 116
           D DTSGL+V+AR  A    +  +   R+V ++Y A+     V    +    +VD P+  D
Sbjct: 159 DRDTSGLMVVARTRATMDAMVALIAAREVKRQYLAIGHKPWVGAAAR----QVDAPIGRD 214

Query: 117 WPNRPRQKV---DFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHP 173
             NR R  V   +   GK + T   RL  D+ ++   V     TGRTHQ+RVHMA+IGHP
Sbjct: 215 PRNRLRMAVVDLERHAGKTARTLIERL--DSHSEGCVVRCTLETGRTHQIRVHMASIGHP 272

Query: 174 ILGDELYAGPAQARAERLLLHASRLEFRHPITDEALSFESPPP 216
           ++GD LY G       R  LHA RL F HP+T E + F SPPP
Sbjct: 273 LVGDALYGGAPAVGLSRQALHAFRLAFVHPVTQEPMEFRSPPP 315