Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 326 a.a., 23S rRNA pseudouridine synthase (NCBI) from Escherichia coli BW25113

 Score =  120 bits (301), Expect = 3e-32
 Identities = 80/228 (35%), Positives = 118/228 (51%), Gaps = 22/228 (9%)

Query: 7   PPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQ-----AVFADAMIAHRL 61
           P D  LD++YED  ++++NKP  L+  PG G      L + +      A    A I HRL
Sbjct: 79  PQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRL 138

Query: 62  DMDTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRP 121
           D DT+GL+V+A+    Q +L E  + R++++ Y+AV  G +    G VD P I   P + 
Sbjct: 139 DKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMT-AGGTVDEP-ISRHPTKR 196

Query: 122 RQKVDFQEGKPSLTRFRRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELYA 181
                   GKP++T +R +         R+ LE  TGRTHQ+RVHMA I HP++GD +Y 
Sbjct: 197 THMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLE--TGRTHQIRVHMAHITHPLVGDPVYG 254

Query: 182 G---PAQARAE----------RLLLHASRLEFRHPITDEALSFESPPP 216
           G   P +  +E          R  LHA+ L   HPI+   + + +P P
Sbjct: 255 GRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIP 302