Pairwise Alignments

Query, 217 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 238 a.a., Ribosomal large subunit pseudouridine synthase A from Alteromonas macleodii MIT1002

 Score =  196 bits (497), Expect = 4e-55
 Identities = 107/218 (49%), Positives = 133/218 (61%), Gaps = 4/218 (1%)

Query: 4   YQPPPDTGLDLLYEDGALVVVNKPAGLLSVPGRGEDKADCLVSRVQAVFADAMIAHRLDM 63
           Y PP    LD LY+D  +VV +KP+GLLSVPG+  +  D L+SRV  V+  A + HRLDM
Sbjct: 8   YNPPMTPYLDFLYQDEDMVVAHKPSGLLSVPGKALEHRDSLISRVNRVYPTATVVHRLDM 67

Query: 64  DTSGLLVLARGPAMQKKLFEMFRERKVSKRYQAVVAGVLQDKEGEVDLPLIVDWPNRPRQ 123
            TSG+LVLA      + + + F  R+  KRY A V G ++   GEV+LPLI DWPNRP+Q
Sbjct: 68  ATSGILVLALNKDSHRHISKQFELRQTKKRYFARVHGHVEQDSGEVNLPLICDWPNRPKQ 127

Query: 124 KVDFQEGKPSLTRF---RRLAVDAAADSSRVELEPVTGRTHQLRVHMAAIGHPILGDELY 180
            VDF+ GK ++T F    R   +     S V L P+TGR+HQLRVHM A+GHPILGD LY
Sbjct: 128 MVDFERGKKAVTHFDVIERTLDEKERPYSLVALYPITGRSHQLRVHMLALGHPILGDRLY 187

Query: 181 A-GPAQARAERLLLHASRLEFRHPITDEALSFESPPPF 217
           A   A + A RL LHA  L   HP     L F    PF
Sbjct: 188 AHEEALSMAPRLQLHAESLSLSHPTLGHWLHFNVAIPF 225