Pairwise Alignments

Query, 388 a.a., arabinose efflux permease family protein from Dechlorosoma suillum PS

Subject, 400 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  146 bits (369), Expect = 9e-40
 Identities = 119/378 (31%), Positives = 179/378 (47%), Gaps = 13/378 (3%)

Query: 9   RLSGYYFFHFAFVGVFQPYFGLYLQSLGLSSWEIGLILSQMALMRLCSPAVWGWLADHLH 68
           RL   Y   F  +G+FQPY  L+LQ+ GL    +GL+L+   L RL +  + G L+D L 
Sbjct: 20  RLGAAYGTFFIALGIFQPYLPLWLQARGLGPEAMGLVLAVPMLSRLAATPLLGLLSDRLG 79

Query: 69  VRIPLVRLAAGVSVVVFNLFFFAQTLVPLLGAMALLAFFWSAALPLMETVVFDHLHAEPA 128
               L+ L    +V    L  F  +L  +L  +  ++  W     L+++       A  A
Sbjct: 80  RPRALLTLLGMATVAAMVLLAFTSSLPAILLILGAMSAAWFPGFSLLDSYTSRLARAGRA 139

Query: 129 RYSRVRIWGSIGYIVTVLATGALLDYLPPASVLWMSFALMGGILAFALLVPESPTPPQHV 188
            Y R R WGS  ++   LA G ++  L   SV+ +   ++ G +A+ L     P  P+  
Sbjct: 140 EYGRARQWGSASFLAANLAGGVIVGALGADSVVLL---MIAGHVAYVLATFALPELPRAE 196

Query: 189 ATP-PVSTILAQPRVRALLGACFLMSAAHGALYLFYSIYLADHGYSKTLVGSLWFLGVIA 247
           A P P++   A+    A + A  L+ A+H  LYLF +++    G S T++G LW +GV A
Sbjct: 197 AMPSPLTGRRARLGFLAGIVAAGLVQASHAVLYLFATVHWRSEGISLTVIGVLWAVGVAA 256

Query: 248 EIGVFFFMARLLRRFSLRQVLLASFAAAVLRFLLIGWGVDSLPVLLGAQLLHGLTFGAYH 307
           E+ +F F   LL RF    ++    AAAV+RF ++      L VLL  Q+LH LTF A +
Sbjct: 257 EMVLFRFGRPLLGRFGAYGMIAIGGAAAVVRFAVMA-SDPPLAVLLPLQMLHALTFAATY 315

Query: 308 AAAIAAINRWFPGRCQARGQ---ALYSSLSFGAGGLLGGLVSGWTWDGLGNAATFGIGAL 364
            A +  + R         GQ   A  SSL   A  +  G +    W   G  A     AL
Sbjct: 316 LAMVDLVARGVSEHRSGTGQTTAAWTSSLMSSAANVAAGPL----WAAFGPMAFLAGCAL 371

Query: 365 -FAVCGLVLVAGWVRDES 381
             A  G+ LVA  ++ +S
Sbjct: 372 GLAGAGVALVAARLQPQS 389