Pairwise Alignments

Query, 602 a.a., NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit from Dechlorosoma suillum PS

Subject, 530 a.a., NADH-quinone oxidoreductase subunit F from Magnetospirillum magneticum AMB-1

 Score =  251 bits (642), Expect = 4e-71
 Identities = 197/563 (34%), Positives = 269/563 (47%), Gaps = 72/563 (12%)

Query: 10  AVLEAVLSKRRRDPTQLLQILREVQEQVGYIPPPALTAIAAALKLPRARVEGVAGFYSFL 69
           A + AVL +  R    L++ L  +Q+  G +    L A+A  ++L  A V+  A FY+  
Sbjct: 22  AEIVAVLPEDFRRRDLLIENLHGLQDGFGGLYRHHLAALAEEMRLSPAEVQETASFYAHF 81

Query: 70  HLQPVGKYRVLFSDNATDRLLGNLDLLGTMCQKLWVEQGKVSEDGLVSVDVTSCTGMCDQ 129
            L           D+            G  C    ++ G +  DG++  DV  CTG+CD 
Sbjct: 82  RL---------LDDHEAAPAAVLRRCTGPACSMRPLDLGALP-DGVMVEDVP-CTGLCDH 130

Query: 130 GPALLVNGRPITRLTHQRV-NEICELIRSRRPLSLWPQEYFRVEDNIRRKDDLLNTVLEP 188
            P  L    P+ R    +V   + E      P      E F V D     +         
Sbjct: 131 APVALAGKVPVRRADAAKVARALAEPYSPPMPSG----ESFPVLDRCLSGE--------- 177

Query: 189 GAALAAAMALGPEAWLGEVQKSSLRGRGGAGFTTGVKWEACRNAPGEERVIVCNADEGEP 248
                    L  +  L E++++ LRG GGAGF T  KW +    PG  R++V NADEGEP
Sbjct: 178 ---------LPRDEALTELERAGLRGMGGAGFPTARKWRSVAAQPGP-RLVVVNADEGEP 227

Query: 249 GTFKDRVLLTSYPDHVFEGMTLAAYATGARQGFLYLRGEYRYLLEPLEAALQRRREAGLL 308
           GTFKDR  L ++   V EG  +AA+A  A + +LYLR EY  L + L   ++        
Sbjct: 228 GTFKDRWFLENHAAQVLEGALIAAWAVEADEVYLYLRDEYADLHKGLATLIR-------- 279

Query: 309 GQGIRGQASFDFDIEIHL--GAGAYVCGEETALIESLEGKRGTPRIRPPFPVIKGYLGRP 366
                       DI IHL  GAGAYVCGEE+ALIESLEGKRG PR RPP+    G  GRP
Sbjct: 280 --------DLPGDITIHLRRGAGAYVCGEESALIESLEGKRGLPRQRPPYVAEVGLFGRP 331

Query: 367 TVVNNVETLAKTVLIALEGAERFAAVGTAQSTGTKLLSISGDCAFPGIYEYPFGVSIEQI 426
           T+VNNVETL     +  EGAE F   G     G +  S+SG    PG+   P G+++ ++
Sbjct: 332 TLVNNVETLYWVSRLLAEGAELFGNEGRNGHHGLRTYSVSGRVKEPGVKIAPNGITVSEL 391

Query: 427 LED-CGATD----VQAVQVGGASGTCLASYEFHRGIAYEDVPTAGSF------MIFDTSR 475
           +++ CG  +    + A   GGASG  L +      +A+  +   G F      ++F  + 
Sbjct: 392 IDEFCGGMEDGHVLAAYLPGGASGGFLPA-RLQPPLAFGAIEEHGGFIGSAAVVVFSQAD 450

Query: 476 DLFEVARNFVHFFAHESCGFCTPCRVGTSLLRNFMDKLATGHGAKYDLADIEWINRLLKA 535
           DL  VA N   FFAHESCG CTPCRVGT+     +   A       DLA +      ++ 
Sbjct: 451 DLRAVALNLARFFAHESCGQCTPCRVGTAKSVGLLAGPAWDRDLLDDLAGV------MRD 504

Query: 536 ASHCGLGLAAANPVVETLIKFRP 558
           AS CGLG AA N V ++L +  P
Sbjct: 505 ASICGLGQAAPN-VWQSLFRHFP 526