Pairwise Alignments

Query, 393 a.a., hydrogenase (NiFe) small subunit HydA from Dechlorosoma suillum PS

Subject, 336 a.a., Periplasmic [NiFeSe] hydrogenase small subunit from Xanthobacter sp. DMC5

 Score =  114 bits (285), Expect = 4e-30
 Identities = 85/281 (30%), Positives = 131/281 (46%), Gaps = 34/281 (12%)

Query: 61  SVIWLHFQECTGCTESMLRAEHPTIEKLILDV-ISLDYHETLFAAAGHQIEAAKQAAMKA 119
           +V+WL    C GCT S+L AE P +   +    I   +H TL    G +  A  +A +  
Sbjct: 7   TVLWLQSGGCGGCTMSLLCAEAPDLAATLASANIRFLWHPTLSEETGDEAIALFEAVLSG 66

Query: 120 NKGQYLLVVEGAI---PTKDGGIYCKVGGKT-AIDIVKECATDAAAIIAIGSCASWGGMP 175
           +     L +EGA+   P   G  +   G  T  ID V+  A  A  ++A+G+CA++GG+ 
Sbjct: 67  DIRLDALCIEGALLRGPNGTGRFHTLAGTDTPTIDWVRRLAAVAEHVVAVGTCAAYGGVT 126

Query: 176 STDPNPTGAVGV---------------NKIIDKPVVTIPGCPPNPYNFLSTVVHFLTFGQ 220
           +   NP  A G+                     PV+ + GCP +P N+++  +  L+ G 
Sbjct: 127 AAGVNPADACGLQYDGRRPGGALGAEFRARAGLPVINVAGCPTHP-NWVTETLMLLSAGL 185

Query: 221 L--PPVDELGRPKFAYSRLVHENCERRAHFDAGRFAMEFGDEGHRKGYCLYK-LGCKGPE 277
           L    +D  GRP+F    LVH  C R  +++    A +  D G     C+ + LGC G +
Sbjct: 186 LHGGDLDTYGRPRFYADHLVHHGCPRNEYYEYKASAEKMSDLG-----CMMEHLGCLGTQ 240

Query: 278 TYANCPTILFGDAGAGTWPVACGHPCIGCTEQGVGFQKPIH 318
            +A+C T L+   G+ T     GH CI CT     F++P H
Sbjct: 241 AHADCNTRLWNGEGSCT---RGGHACINCT--APEFEEPGH 276