Pairwise Alignments

Query, 330 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 320 a.a., TRAP transporter substrate-binding protein from Variovorax sp. OAS795

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 84/324 (25%), Positives = 135/324 (41%), Gaps = 44/324 (13%)

Query: 23  AADGQPVVRWRLASSY-PKSLDT---LYGASEVLANRVAALTEGRFQIRPFAAGEIVPGL 78
           AA  Q   +W+LA+ Y  +S  T    + A+E+      AL   R ++RP     +    
Sbjct: 12  AASAQAETKWQLATGYRAESFHTQNIAWFAAEIERTTAGAL---RIEVRP--NNTLFKLA 66

Query: 79  QALDAVQQDTVECGHTLGSFYVGKNRAFAFDSVLPF--GLTTRQQTAW--------MHFG 128
              +AVQ   V+ G T+ S  V        D++ PF  G     +  W         HF 
Sbjct: 67  DIREAVQTGQVQAGETIMSSLVEAIPIAGADAI-PFVVGNYADARRLWDLQRPLIDKHFA 125

Query: 129 NGLTLLRELYRDYGVINFPGGNTGAQMGGWFRKELQGLADLKGLKMRIPGLGG-EIMARL 187
                L+ LY     + +P        G +    ++  AD KG +MR        I   +
Sbjct: 126 --ARGLKALY----AVPWP------PQGLYTVAPVRSAADFKGTRMRTYNQATVRIAEMM 173

Query: 188 GAVPQTIPGADVYPALEKGAIDAAEWSGP--YDDEKLGFFKVARYYYHPGWWEPSAQLSF 245
           GA P  +P  DV  AL  G +D+   S     +++  G F   R+Y+    W P   +  
Sbjct: 174 GATPVDVPMVDVRKALAAGQLDSMITSAVTGVENQVWGQF---RHYHEINAWFPKNIV-- 228

Query: 246 LVNAREWEKLPKAYQQAFEVAAAEAHLLTTAEYDAKNPPALTRLLAQGVKLRRFPD---- 301
            VN + ++ LP A +QA   AA EA L   A+   +   A  +L A+G+++ R P     
Sbjct: 229 FVNLKAFDALPPAARQAVLTAAGEAELRGWAKSQEEADSATRKLKAEGMQVDRVPSSFDA 288

Query: 302 DVMKAAYRAAFAFYERVGRESSEI 325
           ++ +   R +  +   VG E++ I
Sbjct: 289 ELKRYGERFSREWVRSVGNEANSI 312