Pairwise Alignments

Query, 616 a.a., excinuclease ABC, C subunit from Dechlorosoma suillum PS

Subject, 668 a.a., excinuclease ABC subunit UvrC from Ralstonia solanacearum UW163

 Score =  619 bits (1596), Expect = 0.0
 Identities = 338/646 (52%), Positives = 433/646 (67%), Gaps = 40/646 (6%)

Query: 9   APAAGPAAPAFDAKTFLATLTDLPGVYRMLDAEGKVLYVGKAKNLKKRVSSYFQRTVSSP 68
           AP   P+  AFDAK  +A L +LPGVYR  DA+G VLYVGKA++LKKRVSSYF +T+ SP
Sbjct: 25  APVVDPSDAAFDAKAHIARLPNLPGVYRYFDAQGSVLYVGKARDLKKRVSSYFTKTLLSP 84

Query: 69  RIALMVSRICGIDTTVTRSEAEALLLENNLIKSLDPPFNILFRDDKSYPYVQLTRDQFPR 128
           RIA+MV++I  I+TTV RSEAEALLLENNLIK+L P +NILFRDDKSYPY++L++  +PR
Sbjct: 85  RIAMMVAKIARIETTVVRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLSQHAYPR 144

Query: 129 LAFFRGAPDRKADYYGPFPAASVVRDSIHLLQKTFHLRTCEDSVFANRSRPCLLYQIHRC 188
           +A++RGA DR+  Y+GPFP+A  VR+S+ +LQK F LRTCED+VF NR+RPCLL+QIHRC
Sbjct: 145 MAYYRGATDRRHQYFGPFPSAHAVRESMQILQKVFQLRTCEDTVFNNRTRPCLLHQIHRC 204

Query: 189 SGPCVGLISAEDYAKDVQLAAMFLKGKQHEVIQRLTEAMEQASMALAFEQAAVLRDRIQG 248
           + PCV  IS EDYA+DV  AA FL G+Q EV+Q L + M++ ++AL FEQAA +RD+I  
Sbjct: 205 TAPCVQAISPEDYARDVANAAGFLLGRQDEVMQTLQDKMQRHAVALEFEQAAAVRDQIGA 264

Query: 249 LRRIQEKQYVDS-GRDEDADVVVAVQESGMLCLNLAMIRGGQHLGDKPLFPKNAAD---- 303
           L  +  +Q V+  G+  D D++    E G  C+NLAM+RGG+HLGDK  FP +  D    
Sbjct: 265 LSTVLTRQSVEEVGQASDIDILAVAIEGGHACVNLAMVRGGRHLGDKAYFPTHVEDGAAI 324

Query: 304 ----------------CEPA--------EAIAAFLDQHYREHPIPARILVNVPPADEEAA 339
                            EPA        + + AF+ QHY +  +P  ++V+ P       
Sbjct: 325 VGVDVEADVPEGAETQPEPARDPERMARDILEAFVAQHYLDQFVPPVLVVSHPIRAAGLI 384

Query: 340 ESLAALAERPVPIQEPRQTAHRMWVEMAVQNARIAIASRRATLSMQGQRLEALQEALG-- 397
           E+LAA A R V +    Q A R W+EMA + A +++A R +    Q  R  AL E +G  
Sbjct: 385 EALAAQAGRRVSVVRQPQGARRAWLEMAEKGAELSLARRLSEQGSQQARTRALAETIGID 444

Query: 398 ---LAELPQRIECFDISHTQGEATVASCVVYQGNGMRKSEYRRYNIRDIQKGDDYAAMRQ 454
              LA L  R+ECFDISHT GEAT ASCVV+  + M+  EYRRYNI+ I  GDDYAAMRQ
Sbjct: 445 LEDLATL--RVECFDISHTAGEATQASCVVFHSHAMQNGEYRRYNIQGITPGDDYAAMRQ 502

Query: 455 AVSRRYDKV----AVGEGVCPDLILIDGGKGQVGVAYSALEELGLAHVPMIGVAKGVERK 510
            ++RRY KV    A      P ++LIDGGKGQV VA    EELGL    ++GVAKG  RK
Sbjct: 503 VLTRRYQKVVEQAAEDAPDVPHIVLIDGGKGQVEVARQVFEELGLDIGLLVGVAKGEGRK 562

Query: 511 VGLEQLIFPDGRKPLQLPSTHPALHLIQEIRDESHRFAVSGHRAQRGKARRTSTLEEIPG 570
           VGLE L+F D R  L+L     AL L+ +IRDE+HRFA++G RA+R KAR TS LEEI G
Sbjct: 563 VGLETLVFADERPSLELGQGSAALMLVAQIRDEAHRFAITGMRAKRAKARNTSRLEEIEG 622

Query: 571 VGPTRRKALIAHFGGLQGIAGASVDRLAEVPGISRDLAERIYSALH 616
           +G  RR+ L+A FGGL+G+  ASV+ L  V GIS+ LAE IY  LH
Sbjct: 623 IGAKRRQRLLARFGGLRGVMTASVEELTTVEGISQTLAEEIYRQLH 668