Pairwise Alignments

Query, 616 a.a., excinuclease ABC, C subunit from Dechlorosoma suillum PS

Subject, 607 a.a., UvrABC system protein C from Pseudomonas sp. DMC3

 Score =  605 bits (1560), Expect = e-177
 Identities = 306/602 (50%), Positives = 414/602 (68%), Gaps = 5/602 (0%)

Query: 19  FDAKTFLATLTDLPGVYRMLDAEGKVLYVGKAKNLKKRVSSYFQRTVSSPRIALMVSRIC 78
           FD+  FL+T++  PGVYRM D+E ++LYVGKAKNLKKR++SYF++T  +P+ A +V RI 
Sbjct: 5   FDSSAFLSTVSGRPGVYRMFDSEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVGRIA 64

Query: 79  GIDTTVTRSEAEALLLENNLIKSLDPPFNILFRDDKSYPYVQLTRDQFPRLAFFRGAPDR 138
            ++TT+T +E EALLLE  LIK   PP+NIL RDDKSYPYV L+  QFPRL+  RGA   
Sbjct: 65  QVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGQFPRLSIHRGAKKA 124

Query: 139 KADYYGPFPAASVVRDSIHLLQKTFHLRTCEDSVFANRSRPCLLYQIHRCSGPCVGLISA 198
           K  Y+GP+P+A  +R+S+ +LQKTF +R CEDS + NR+RPCL YQI RC  PCVGL+  
Sbjct: 125 KGKYFGPYPSAGAIRESLSILQKTFFVRQCEDSYYKNRTRPCLQYQIKRCKAPCVGLVEP 184

Query: 199 EDYAKDVQLAAMFLKGKQHEVIQRLTEAMEQASMALAFEQAAVLRDRIQGLRRIQEKQYV 258
           + YA+DV+ + MFL+G+ H +   L+ AME+A++ L FE+AA LRD+I  LRR+Q++Q +
Sbjct: 185 DVYAEDVRHSVMFLEGRSHALTNELSTAMEEAAINLEFERAAELRDQIALLRRVQDQQSM 244

Query: 259 DSGRDEDADVVVAVQESGMLCLNLAMIRGGQHLGDKPLFPKNAADCEPAEAIAAFLDQHY 318
           + G   D DV+ A    G  C++L  +RGG+ LG K  FP+   + + +E +AAFL Q+Y
Sbjct: 245 EGGTG-DIDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEDVSEVMAAFLGQYY 303

Query: 319 REHP---IPARILVNVPPADEEAA-ESLAALAERPVPIQEPRQTAHRMWVEMAVQNARIA 374
              P   +P+ ++VNV   D  A  E +  L  R + I    +     W ++AV NA  A
Sbjct: 304 ISSPERDLPSELIVNVVHEDFPALIEGIHTLRGRELAISHRVRGTRARWQQLAVTNAEQA 363

Query: 375 IASRRATLSMQGQRLEALQEALGLAELPQRIECFDISHTQGEATVASCVVYQGNGMRKSE 434
           + +R A       R +AL E L L E PQR+EC+DISH+ GEATVASCVV+   G  KS+
Sbjct: 364 LGARLANRQHTAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGAIKSD 423

Query: 435 YRRYNIRDIQKGDDYAAMRQAVSRRYDKVAVGEGVCPDLILIDGGKGQVGVAYSALEELG 494
           YRRYNI  +  GDDYAAM QA++RR+ K+  GEG  PD++L+DGGKGQ+ +A   L EL 
Sbjct: 424 YRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNELA 483

Query: 495 LAHVPMIGVAKGVERKVGLEQLIFPDGRKPLQLPSTHPALHLIQEIRDESHRFAVSGHRA 554
           +  + ++GVAKG  RK G E L   D      L    PALHLIQ+IRDE+HRFA++GHRA
Sbjct: 484 VPDLILLGVAKGATRKAGFETLYLNDAAHEFTLRGDSPALHLIQQIRDEAHRFAITGHRA 543

Query: 555 QRGKARRTSTLEEIPGVGPTRRKALIAHFGGLQGIAGASVDRLAEVPGISRDLAERIYSA 614
           +RGK RRTSTLE + GVGPTRR+ L+ HFGGLQ ++ AS++ +A+ PGIS+ LAE IY+ 
Sbjct: 544 RRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIEEIAKAPGISKKLAESIYAN 603

Query: 615 LH 616
           LH
Sbjct: 604 LH 605