Pairwise Alignments

Query, 616 a.a., excinuclease ABC, C subunit from Dechlorosoma suillum PS

Subject, 610 a.a., excinuclease ABC subunit UvrC from Escherichia coli ECRC99

 Score =  553 bits (1424), Expect = e-161
 Identities = 299/607 (49%), Positives = 403/607 (66%), Gaps = 13/607 (2%)

Query: 19  FDAKTFLATLTDLPGVYRMLDAEGKVLYVGKAKNLKKRVSSYFQRTVSSPRIALMVSRIC 78
           FDAK FL T+T  PGVYRM DA G V+YVGKAK+LKKR+SSYF+  ++S +   +V++I 
Sbjct: 5   FDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQ 64

Query: 79  GIDTTVTRSEAEALLLENNLIKSLDPPFNILFRDDKSYPYVQLTRDQFPRLAFFRGAPDR 138
            ID TVT +E EALLLE+N IK   P +N+L RDDKSYP++ L+ D  PRLA  RGA   
Sbjct: 65  QIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHA 124

Query: 139 KADYYGPFPAASVVRDSIHLLQKTFHLRTCEDSVFANRSRPCLLYQIHRCSGPCV-GLIS 197
           K +Y+GPFP    VR+++ LLQK F +R CE+SV+ NRSRPCL YQI RC GPCV GL+S
Sbjct: 125 KGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVS 184

Query: 198 AEDYAKDVQLAAMFLKGKQHEVIQRLTEAMEQASMALAFEQAAVLRDRIQGLRRIQEKQY 257
            E+YA+ V+   +FL GK  +V+ +L   ME AS  L FE+AA +RD+IQ +RR+ EKQ+
Sbjct: 185 EEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQF 244

Query: 258 VDSGRDEDADVVVAVQESGMLCLNLAMIRGGQHLGDKPLFPKNAADCEPAEAIAAFLDQH 317
           V S   +D DV+    ++GM C+++  IR G+ LG +  FPK     E +E +  F+ Q 
Sbjct: 245 V-SNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQF 303

Query: 318 YRE----HPIPARILVNVPPADEE-AAESLAALAERPVPIQEPRQTAHRMWVEMAVQNAR 372
           Y +      +P  IL++   +D+   A+SL+ LA R + +Q   +     ++++A  NA 
Sbjct: 304 YLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAA 363

Query: 373 IAIASRRATLSMQGQRLEALQEALGLAELPQRIECFDISHTQGEATVASCVVYQGNGMRK 432
            A+ S+ +  S   QRL AL   L L E+ +R+ECFDISHT GE TVASCVV+  NG  +
Sbjct: 364 TALTSKLSQQSTVHQRLTALASVLKLPEV-KRMECFDISHTMGEQTVASCVVFDANGPLR 422

Query: 433 SEYRRYNIRDIQKGDDYAAMRQAVSRRYDKVAVGEGVCPDLILIDGGKGQVGVAYSALEE 492
           +EYRRYNI  I  GDDYAAM Q + RRY K A+ +   PD+ILIDGGKGQ+  A +   E
Sbjct: 423 AEYRRYNITGITPGDDYAAMNQVLRRRYGK-AIDDSKIPDVILIDGGKGQLAQAKNVFAE 481

Query: 493 LGLA----HVPMIGVAKGVERKVGLEQLIFPDGRKPLQLPSTHPALHLIQEIRDESHRFA 548
           L ++    H  ++GVAKG +RK GLE L F    +   LP   PALH+IQ IRDESH  A
Sbjct: 482 LDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHA 541

Query: 549 VSGHRAQRGKARRTSTLEEIPGVGPTRRKALIAHFGGLQGIAGASVDRLAEVPGISRDLA 608
           + GHR +R K + TS+LE I GVGP RR+ L+ + GGLQG+  ASV+ +A+VPGIS+ LA
Sbjct: 542 IGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLA 601

Query: 609 ERIYSAL 615
           E+I+ +L
Sbjct: 602 EKIFWSL 608