Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase D from Pseudomonas simiae WCS417

 Score =  120 bits (302), Expect = 3e-32
 Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 37/327 (11%)

Query: 11  RATIGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVNSKRADAAYRIQAGDILRIP 70
           RA +  +  GQRLD    ++     +S +   ++ G + V+         +  G IL + 
Sbjct: 8   RAEVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKDGRLTVDGAVIRPRDIVHGGAILEL- 66

Query: 71  PIRVAARPDEVAAAEVAGQAVKADLPL--LYEDDALLAVNKPAGIAVHGGSGVSFG-VIE 127
                      A  E  G+ V  D+ L  +YEDD +L +NKPAG+ VH  +G + G ++ 
Sbjct: 67  ----------TAEQEAQGEWVAQDIELDIVYEDDDILVINKPAGLVVHPAAGHADGTLLN 116

Query: 128 ALRHQRPQ---AKLLELAHRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRYL- 183
           AL H  P         + HRLD++T+G+++VAK   A T L    +     R  +   + 
Sbjct: 117 ALLHHVPDIINVPRCGIVHRLDKDTTGLMVVAKTIQAQTQLVTQLQSRSVSRIYECIVIG 176

Query: 184 -VAVQGRWMDPL-RHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRFSLLEAE 241
            V   G+   P+ RH +Q     +++ G++ V        SH  +R++ R++  + +  +
Sbjct: 177 VVVAGGKINAPIGRHGQQRQRMAVMEGGKQAV--------SH--YRVLERFRSHTHVRVK 226

Query: 242 LKSGRTHQIRVHLAHLGYPILGDDKYGD-------FALNRELQREGLKRMFLHAWRMRFP 294
           L++GRTHQIRVH+AH+ +P++GD  YG         +       +   R  LHA  +   
Sbjct: 227 LETGRTHQIRVHMAHINFPLVGDPAYGGRFRIPPAASATMVDSLKNFPRQALHARFLELD 286

Query: 295 HPLTKEAMSLEAPLPPALASFLHHLSE 321
           HP + + MS E+PLP  L   L  L +
Sbjct: 287 HPTSGKRMSWESPLPDDLVWLLSLLKQ 313