Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas simiae WCS417

 Score =  280 bits (717), Expect = 3e-80
 Identities = 153/314 (48%), Positives = 207/314 (65%), Gaps = 8/314 (2%)

Query: 8   SVTRATIGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVNSKRADAAYRIQAGDIL 67
           SV    +  +  GQR+DN+LL   KGVPK+ IYRILR GEVRVN  R    Y++QAGDI+
Sbjct: 10  SVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDIV 69

Query: 68  RIPPIRVAARPDEVAAAEVAGQAVKADLPLLYEDDALLAVNKPAGIAVHGGSGVSFGVIE 127
           R+PP+RV  R + V  A+   Q ++A +  ++ED+ L+ +NKP GIAVHGGSG++FGVIE
Sbjct: 70  RVPPVRVPERDEPVPLAQGLLQRLEASI--IFEDNKLIVINKPCGIAVHGGSGLNFGVIE 127

Query: 128 ALRHQRPQAKLLELAHRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRYLVAVQ 187
           A R  RP AK LEL HRLDR+TSG+L++AKKRS L  LH   R    G G DKRY+  V+
Sbjct: 128 AFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHTALR----GDGVDKRYMALVR 183

Query: 188 GRWMDPLRHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRF-SLLEAELKSGR 246
           G W   ++  R  L K  L +GER V VD EGK + T+F+++ R+  F +++EA+  +GR
Sbjct: 184 GNWASSIKSVRAPLQKSNLRSGERMVEVDEEGKEALTLFKVLRRFGDFATMVEAKPVTGR 243

Query: 247 THQIRVHLAHLGYPILGDDKYGDFALNRELQREGLKRMFLHAWRMRFPHPLTKEAMSLEA 306
           THQIRVH  H G+ I GD KYGD   ++E++  G KR+FLHA+ +  P P   E + L+A
Sbjct: 244 THQIRVHTLHAGHCIAGDTKYGDEDFSKEIRDLGGKRLFLHAYMLTVPLPDGGE-LKLQA 302

Query: 307 PLPPALASFLHHLS 320
           P+    A  +  LS
Sbjct: 303 PVDEMWAKTVERLS 316