Pairwise Alignments

Query, 331 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

Subject, 319 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Escherichia coli ECOR27

 Score =  303 bits (775), Expect = 5e-87
 Identities = 163/314 (51%), Positives = 209/314 (66%), Gaps = 7/314 (2%)

Query: 8   SVTRATIGEDEQGQRLDNYLLRVCKGVPKSHIYRILRSGEVRVNSKRADAAYRIQAGDIL 67
           SV    I  DE GQR+DN+L    KGVPKS IYRILR GEVRVN KR    Y+++AGD +
Sbjct: 7   SVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEV 66

Query: 68  RIPPIRVAARPDEVAAAEVAGQAVKADLPLLYEDDALLAVNKPAGIAVHGGSGVSFGVIE 127
           RIPP+RVA R +E  +  +   A  AD+ +LYEDD +L +NKP+G AVHGGSG+SFGVIE
Sbjct: 67  RIPPVRVAEREEEAVSPHLQKVAALADV-ILYEDDHILVLNKPSGTAVHGGSGLSFGVIE 125

Query: 128 ALRHQRPQAKLLELAHRLDRETSGILLVAKKRSALTALHDMFREGGAGRGADKRYLVAVQ 187
            LR  RP+A+ LEL HRLDR+TSG+LLVAKKRSAL +LH+  RE    +G  K YL  V+
Sbjct: 126 GLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRE----KGMQKDYLALVR 181

Query: 188 GRWMDPLRHCRQALHKYLLDNGERRVRVDPEGKPSHTVFRLVARWQRFSLLEAELKSGRT 247
           G+W   ++  +  L K +L +GER VRV  EGKPS T F++  R+   +L+     +GRT
Sbjct: 182 GQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRT 241

Query: 248 HQIRVHLAHLGYPILGDDKYGDFALNRELQR--EGLKRMFLHAWRMRFPHPLTKEAMSLE 305
           HQIRVH  + G+PI  DD+YGD   +R+L     GL R+FLHA  ++F HP T E M +E
Sbjct: 242 HQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIE 301

Query: 306 APLPPALASFLHHL 319
           AP+   L   L  L
Sbjct: 302 APMDEGLKRCLQKL 315