Pairwise Alignments

Query, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

Subject, 671 a.a., Excinuclease ABC subunit B from Pseudomonas fluorescens GW456-L13

 Score =  924 bits (2388), Expect = 0.0
 Identities = 462/666 (69%), Positives = 557/666 (83%), Gaps = 6/666 (0%)

Query: 19  SPYRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIARTGRPALI 78
           S ++L   F PAGDQPEAIRL+VEG+E GL++QTLLGVTGSGKT+++ANVIA+  RP L+
Sbjct: 2   SEFQLVTRFEPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTLV 61

Query: 79  LAPNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSINDHIEQM 138
           LAPNKTLAAQLY EF+ F P NAVEYFVSYYDYYQPEAYVPS D FIEKD+SINDHIEQM
Sbjct: 62  LAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQM 121

Query: 139 RLSATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRLSEMQYE 198
           RLSATK+LLER+D +IV TVSCIYG+G  + Y  M+LH+ +GD+  QR++++RL+++QY 
Sbjct: 122 RLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDRLDQRELLRRLADLQYT 181

Query: 199 RNEVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLHKLPRFT 258
           RN++DF R TFRVRGDVIDI PAE    AIR+ LFDDE+E+L  FDPLTG ++ KLPRFT
Sbjct: 182 RNDMDFARATFRVRGDVIDIHPAESDFEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFT 241

Query: 259 IYPSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEMLNELGF 318
            YP SHYVTPR T++ AVEGIK EL++RLE+     +LVEAQR+EQRTRFDLEM+ ELG+
Sbjct: 242 FYPKSHYVTPRETLMGAVEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGY 301

Query: 319 CKGIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRSRKENLV 378
           C GIENYSR+LSGR+ G APPTL DYLP DAL+ IDESHV++ QVGAMYKGDRSRKE LV
Sbjct: 302 CNGIENYSRYLSGREAGAAPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLV 361

Query: 379 DYGFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYEKQHQGQVVEQVVRPTGLIDPVV 438
           +YGFRLPSALDNRP++F+E+E +  QTIFVSATP +YE +H G+V++ VVRPTGL+DP +
Sbjct: 362 EYGFRLPSALDNRPMRFDEWESISPQTIFVSATPGNYEAEHAGRVIDMVVRPTGLVDPQI 421

Query: 439 LVRPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVHSDIDTV 498
            +RPA+TQVDDLLSEI KR+A+ ERVLVTTLTKRMAEDLTDYL ++G++VRY+HSDIDTV
Sbjct: 422 EIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDTV 481

Query: 499 ERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAA 558
           ERVEIIRDLRLG FDVLVGINLLREGLD+PEVSLVAILDADKEGFLRSERSLIQTIGRAA
Sbjct: 482 ERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541

Query: 559 RHLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDIIDGVYDP 618
           R+LNG AILYADR+T SM RA+ ETERRR KQ+A N A+GITPKGV K + DI++G   P
Sbjct: 542 RNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATVP 601

Query: 619 DAAQKE----LKAAQQQAVYET--MSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDEL 672
            +  K+     KAA++ A YE    S   +AK IK LE++M   A++LEFE AA  RDE+
Sbjct: 602 GSRSKKRKGMAKAAEENAKYEAELRSPGEIAKRIKALEEKMYALARDLEFEAAAQMRDEI 661

Query: 673 FRLKQQ 678
            +L+++
Sbjct: 662 GKLRER 667