Pairwise Alignments

Query, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

Subject, 677 a.a., UvrABC system protein B from Methylophilus sp. DMC18

 Score = 1034 bits (2674), Expect = 0.0
 Identities = 507/674 (75%), Positives = 584/674 (86%)

Query: 13  VVTFPGSPYRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIART 72
           +VTFPGS Y LHQPFPPAGDQP+AI  L +G+ DGL +QTLLGVTGSGKTYTMANVIART
Sbjct: 2   IVTFPGSKYELHQPFPPAGDQPQAIEKLTQGIHDGLKFQTLLGVTGSGKTYTMANVIART 61

Query: 73  GRPALILAPNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSIN 132
           G+PA+++APNKTLAAQLY+EFREF P NAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSIN
Sbjct: 62  GKPAIVMAPNKTLAAQLYSEFREFFPNNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSIN 121

Query: 133 DHIEQMRLSATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRL 192
           +HIEQMRLSATK+LLER D VIVATVS IYGIGD  +YH M+LH+ QG K  Q+DI+  L
Sbjct: 122 EHIEQMRLSATKALLEREDAVIVATVSAIYGIGDPGEYHGMVLHIHQGKKIAQKDIVAHL 181

Query: 193 SEMQYERNEVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLH 252
             MQY+RN+ DF RG FRVRGD+ID+FP+E++E A+R+ LFDDEI+T+QLFDPLTG + +
Sbjct: 182 IAMQYDRNDFDFSRGCFRVRGDIIDVFPSENSETAVRINLFDDEIDTIQLFDPLTGQIFN 241

Query: 253 KLPRFTIYPSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEM 312
           K+  F I+PSSHYVT R   +RA+E IKEELR+R+ FF  E +LVEAQRIEQRTRFDLEM
Sbjct: 242 KIHNFRIFPSSHYVTAREATVRAMETIKEELRQRVSFFLSENKLVEAQRIEQRTRFDLEM 301

Query: 313 LNELGFCKGIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRS 372
           LNE+GFCKGIENYSRHL+GR PG+ PPTL+DYLP +ALM IDESHV + Q+G MY GDRS
Sbjct: 302 LNEIGFCKGIENYSRHLTGRNPGDPPPTLIDYLPAEALMIIDESHVTVPQIGGMYLGDRS 361

Query: 373 RKENLVDYGFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYEKQHQGQVVEQVVRPTG 432
           RK NLVDYG+RLPSA+DNRPLKFEEFER+MRQ +FVSATP++YEK+HQ QVVE + RPTG
Sbjct: 362 RKANLVDYGWRLPSAMDNRPLKFEEFERIMRQCVFVSATPANYEKEHQQQVVEMIARPTG 421

Query: 433 LIDPVVLVRPAMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVH 492
           L+DP + V+PA TQVDDLL EI++ +AV ERVL TTLTKRMAEDLTDYL E+G+KVRY+H
Sbjct: 422 LVDPEITVKPADTQVDDLLGEIKRCVAVGERVLATTLTKRMAEDLTDYLSEHGVKVRYLH 481

Query: 493 SDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQ 552
           SDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVA+LDADKEGFLRSERSLIQ
Sbjct: 482 SDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAVLDADKEGFLRSERSLIQ 541

Query: 553 TIGRAARHLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDII 612
           T GRAAR+LNG  I YA+ +T SM+ AMDE +RRR  Q+A N  HGITPKGV+KRIKDII
Sbjct: 542 TAGRAARNLNGRVIFYANSITRSMKLAMDEGDRRRKIQLAFNAEHGITPKGVTKRIKDII 601

Query: 613 DGVYDPDAAQKELKAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDEL 672
           DGVYD D AQ+E KAAQ+QA YE+MSEK L KEIKR+EK M ++AKNLEFEKAA  RD+L
Sbjct: 602 DGVYDKDEAQRERKAAQEQASYESMSEKMLTKEIKRIEKAMHDAAKNLEFEKAAQFRDQL 661

Query: 673 FRLKQQAFGAAVHD 686
            +LK QAFGA V D
Sbjct: 662 KKLKLQAFGAEVED 675