Pairwise Alignments

Query, 690 a.a., excinuclease ABC, B subunit from Dechlorosoma suillum PS

Subject, 742 a.a., excinuclease ABC subunit UvrB from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  754 bits (1948), Expect = 0.0
 Identities = 386/664 (58%), Positives = 487/664 (73%), Gaps = 6/664 (0%)

Query: 18  GSPYRLHQPFPPAGDQPEAIRLLVEGLEDGLSYQTLLGVTGSGKTYTMANVIARTGRPAL 77
           G  +RL   + PAGDQP AI  LV   + G   Q LLGVTGSGKT+TMA VI  T RPAL
Sbjct: 37  GGRFRLETKYTPAGDQPAAIAELVAQAQAGDRDQVLLGVTGSGKTFTMAKVIEETQRPAL 96

Query: 78  ILAPNKTLAAQLYAEFREFLPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSINDHIEQ 137
           ILAPNKTLAAQLY+EF+ F P+NAVEYFVSYYDYYQPEAYVP  D +IEKDSSIN+ I++
Sbjct: 97  ILAPNKTLAAQLYSEFKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDR 156

Query: 138 MRLSATKSLLERRDVVIVATVSCIYGIGDKDDYHNMILHLRQGDKAGQRDIIKRLSEMQY 197
           MR SAT+++LER DV++VA+VSCIYGIG  + Y  M   L+ GD+  +  +   L  +QY
Sbjct: 157 MRHSATRAILEREDVIVVASVSCIYGIGSVETYTAMTFTLKVGDQIDEAKLRADLIALQY 216

Query: 198 ERNEVDFQRGTFRVRGDVIDIFPAEHAEHAIRVCLFDDEIETLQLFDPLTGHLLHKLPRF 257
           +RN+++F RG FR RGDVI+IFP    + A R+ LF DE+E +Q FDPLTG     L   
Sbjct: 217 KRNDLNFDRGMFRKRGDVIEIFPVHLEDRAWRISLFGDELEAIQEFDPLTGKKTADLNEI 276

Query: 258 TIYPSSHYVTPRATVLRAVEGIKEELRKRLEFFHKEQRLVEAQRIEQRTRFDLEMLNELG 317
           T+Y +SHYVTPR T+ +A  GIK EL++ L++  +  +L+EAQR+EQRTRFDLEM+   G
Sbjct: 277 TVYAASHYVTPRPTLNQAAAGIKAELKETLDWMVENGKLLEAQRLEQRTRFDLEMMEATG 336

Query: 318 FCKGIENYSRHLSGRKPGEAPPTLLDYLPPDALMFIDESHVAIGQVGAMYKGDRSRKENL 377
            C GIENYSR L+GR PGE PPT  +Y+P +AL+F+DESHV IGQ+  M++GD  RK  L
Sbjct: 337 SCAGIENYSRWLTGRAPGEPPPTFFEYIPDNALLFVDESHVTIGQINGMFRGDYRRKSTL 396

Query: 378 VDYGFRLPSALDNRPLKFEEFERLMRQTIFVSATPSDYEKQHQGQV-VEQVVRPTGLIDP 436
            +YGFRLPS +DNRPLKFEE+E +  QT+ VSATP  +E +  G V VEQV+RPTGLIDP
Sbjct: 397 AEYGFRLPSCIDNRPLKFEEWEAMRPQTVHVSATPGPWEMEQAGGVFVEQVIRPTGLIDP 456

Query: 437 VVLVRP----AMTQVDDLLSEIRKRIAVSERVLVTTLTKRMAEDLTDYLRENGIKVRYVH 492
            V +RP       QVDD++ E++   A   R LVTTLTK+MAEDLT+Y+ E GI+VRY+H
Sbjct: 457 PVEIRPVSGKTRNQVDDVIDEVKATTAKGYRSLVTTLTKKMAEDLTEYMHEQGIRVRYMH 516

Query: 493 SDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQ 552
           SD+DT+ER+EI+RDLRLG FD L+GINLLREGLDIPE  LVAILDADKEGFLRSE SLIQ
Sbjct: 517 SDVDTLERIEILRDLRLGTFDCLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQ 576

Query: 553 TIGRAARHLNGTAILYADRVTDSMRRAMDETERRRAKQMAHNEAHGITPKGVSKRIKDII 612
           TIGRAAR+++G  ILYADR+T SM RA+ ET+RRR +Q+A+N  HGITP+ V + IK+I+
Sbjct: 577 TIGRAARNVDGRVILYADRMTGSMERAIAETDRRRERQVAYNTEHGITPETVKRDIKEIM 636

Query: 613 DGVYDPDAAQKELKAAQQQAVYETMSEKNLAKEIKRLEKQMLESAKNLEFEKAAAARDEL 672
           D  Y+     +  K    +A  +     N    ++ LE +M E+A NLEFE+A   RDE+
Sbjct: 637 DSPYESREMDRLTKPGVAEA-SKPFVGSNFQAALRDLEGRMREAASNLEFEEAGRLRDEI 695

Query: 673 FRLK 676
            R+K
Sbjct: 696 KRMK 699