Pairwise Alignments

Query, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  358 bits (920), Expect = e-103
 Identities = 199/456 (43%), Positives = 278/456 (60%), Gaps = 22/456 (4%)

Query: 192  DITERKLHEERMRYLAHHDQLTGLPNRLLLADRLPQALTRAKRQQSRAAVLFVDLDRFKN 251
            D++  K  + ++R+LA+HD LT LPNR LL DRL Q +   KR   R A+LF+DLD FK+
Sbjct: 646  DVSLLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKH 705

Query: 252  INDSLGHNQGDRLLQSVARRLQECLRQSDTIVRQGGDEFIVILEDL-----QLPEQAGQI 306
            INDSLGH  GD +L+ V  RL+  +R  DT+ R GGDEF+V+L  L     ++  Q  ++
Sbjct: 706  INDSLGHPVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQEL 765

Query: 307  GAKLLETLASPYREDGYDFFLTASIGIALYPDDGDDADTLLRNADTAMYEGKSSGGNTVR 366
               L E L+ P   DG+   +T SIG+AL PD G     LL+ AD A+Y  K SG NT +
Sbjct: 766  ADTLRELLSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQ 825

Query: 367  FYTGRMNERLQSRVSLENGLRRALERDELQLYYQPQIDLASGRLLGAEALLRWND---GG 423
             +   M +    R+ +E  LR AL R E  ++YQPQ+D    R++GAEAL+RW     G 
Sbjct: 826  MFHNSMQKTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGA 885

Query: 424  RLIPPDQFIPVAEETGLIVPIGLWVLDTAIARAAAWRRHWQLRQGMGATPP---RIAINL 480
            +   P +FI V E++GLI+ +G W+LD A A        +Q     G   P    + +N+
Sbjct: 886  Q--SPSEFIKVLEDSGLILEVGTWILDEACAA-------FQQLIAEGLVDPLNFSLCVNI 936

Query: 481  SARQFWGGGIAEHVLLRLEREGLPPSTIELEVTESVLLRQEADCLEELRRLREAGVGLAL 540
            S RQF      E V   L++  LP S ++LE+TE ++++   D + ++RRL++ GV  A+
Sbjct: 937  SPRQFRQNDFVERVERSLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAM 996

Query: 541  DDFGTGYSSLSYLRLLPIDTLKIDKSFIFPLDEDQDGEAAAIVRAILAMAHTLGHKVVAE 600
            DDFGTGYSSL+YL+ LP+D LKID+SF+   D   D   A I+RAI+AMA +L  +V+AE
Sbjct: 997  DDFGTGYSSLTYLKRLPVDALKIDQSFV--RDATHDPNDAEIIRAIVAMARSLNLEVIAE 1054

Query: 601  GVERQTQLELLRTMGCDSFQGYLESRPLPPEAFLQR 636
            GVE Q QL  L+ +GC  +QGYL SRPLP   F +R
Sbjct: 1055 GVETQDQLAFLQGLGCHLYQGYLHSRPLPMIGFRER 1090



 Score = 47.0 bits (110), Expect = 5e-09
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 1/130 (0%)

Query: 75  LRRAARAYELAMEGAHDGMWTWNPLSKELTAGQRLHAILGYG-ENFLMDTHAWLTLVHPE 133
           L+ +    +LA++ A  G W W+  +  L    R   + G   E F     A+   +  +
Sbjct: 278 LKDSQERLDLALDSAQLGTWDWHIPTGMLYGSARAAQLHGLPPEPFHESFDAFFEGMPDD 337

Query: 134 DTARYNRAVSEHLKGLTPHFYCEYRVRAKSGEYRWIASRGIAVRDARGVATLMAGSVTDI 193
           +      A     +G   ++   YRV  + G  R++ SR    RD +G    MAG++ DI
Sbjct: 338 ERESMRNAYRTLREGPAGNYQLTYRVPMEDGSSRYLESRARLYRDEQGAPLRMAGTLLDI 397

Query: 194 TERKLHEERM 203
           T++   E+R+
Sbjct: 398 TDQVEREQRL 407



 Score = 40.0 bits (92), Expect = 6e-07
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 85  AMEGAHDGMWTWNPLSKELTAGQRLHAILGYGENF-LMDTHAWLTLVHPEDTARYNRAVS 143
           A+  A  G W W   S  ++  +   A+ G+     L +   +L L+ PED+AR  RA  
Sbjct: 35  ALNAARLGAWCWEIDSGRISWSRGTQALFGFDPRQPLPNDLDYLDLLAPEDSARVVRAFH 94

Query: 144 EHLKGLTPHFYCEYRVRAKSGEYRWIASRGIAVRDARGVATLMAGSVTDITERKLHEERM 203
             L G        + ++   G   W+   G    D  G    M G + +IT ++   +R 
Sbjct: 95  AVLAGEPFEQAMHHHIQWPDGSLHWLEINGSLAPDKAG-RRRMIGVIREITHQR---DRE 150

Query: 204 RYLAHHDQLTG-----LPNRLLLADRLPQALTRAKR 234
             L+H ++         PN +LL  +    ++ A +
Sbjct: 151 NALSHSEKRFATLFHLCPNMVLLTRQADGLISEANQ 186