Pairwise Alignments

Query, 1198 a.a., transcription-repair coupling factor Mfd from Dechlorosoma suillum PS

Subject, 700 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Sphingobium sp. HT1-2

 Score =  234 bits (598), Expect = 1e-65
 Identities = 151/381 (39%), Positives = 214/381 (56%), Gaps = 18/381 (4%)

Query: 654  FEETEDQATAIAAVIEDMKSGKPMDRLVCGDVGFGKTEVALRAAFVAVAGGKQVAVLCPT 713
            F  T  Q  AI  +  DM    PM RL+ GDVG GKT VAL A   AV  G Q A+L PT
Sbjct: 270  FAPTGAQRRAIGEIEGDMAQATPMLRLLQGDVGSGKTLVALMALLNAVEAGMQGAMLAPT 329

Query: 714  TLLCEQHYQTFKDRFADWPVQIAELSRFKTAKETAQAMKDLEAGKIDIVIGTHKLLSKEM 773
             +L  QHY+T +   +  P++IA L+  +  K     +  L  G I I++GTH +  +++
Sbjct: 330  EILARQHYETLRKMASGLPIEIAILTGREKGKVREATLMGLANGSIHILVGTHAIFQEKV 389

Query: 774  KFDRLGLVMIDEEHRFGVRQKEALKALRAE--VDVLTLTATPIPRTLAMSLEGLRDFSVI 831
            ++  LGL +IDE+HRFGV Q+  L A +AE    +L +TATPIPRTL ++  G  D S +
Sbjct: 390  QYKALGLAVIDEQHRFGVAQRMML-ASKAERSPHLLVMTATPIPRTLTLTYYGEMDVSRL 448

Query: 832  ATAPQKRLAIKTFV--AKFSDGIIREAVLRELKRGGQVYF---LHNEVDTIDNMREKLQS 886
               P  R  I+T V  A   D ++ E + R ++ GGQ Y+   L  E +T D    ++++
Sbjct: 449  DEMPPGRQPIQTLVMSANRLDEVV-EGLARHVEGGGQAYWVCPLVEESETSDQAAAEMRA 507

Query: 887  LVPEA----RIVVGHGQMNERELERVMRDFTQQRANLLLCTTIIETGIDNPHANTILINR 942
                     R+ + HG+M   + +  M  F   R  +L+ TT+IE G+D P+++ I+I  
Sbjct: 508  ETLRQRFGDRVGLVHGKMKGPDKDAAMEAFAANRTQILVATTVIEVGVDVPNSSLIVIEG 567

Query: 943  AEKFGLAQLHQLRGRVGRSHHQAYSYLLVQDEKALTKQAKQRLEAIQHMEELGAGFYLAM 1002
            AE+FGLAQLHQLRGRVGR    +   LL  +    T +A+  L     M E   GF +A 
Sbjct: 568  AERFGLAQLHQLRGRVGRGDKPSVCLLLRGNALGETSRARLAL-----MRETNDGFRIAE 622

Query: 1003 HDLEIRGAGEVLGENQSGEMQ 1023
             DL++RGAGEVLG  QSGE +
Sbjct: 623  EDLKLRGAGEVLGTRQSGEAE 643