Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 857 a.a., DNA mismatch repair protein MutS from Pseudomonas putida KT2440

 Score =  861 bits (2224), Expect = 0.0
 Identities = 475/875 (54%), Positives = 600/875 (68%), Gaps = 37/875 (4%)

Query: 7   SDPSGHTPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGL 66
           SD S HTPMMQQY  LK+QHP  L+FYRMGDFYE+F+EDA+KAA+LLDITLT RGQSAG 
Sbjct: 2   SDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQ 61

Query: 67  PIKMAGVPYHAVEQYLAKLVKMGESVVICEQVGDPATSKGPVERAVSRIVTPGTLTDAAL 126
            I M G+P+H++E YLAKLVK+GESVVICEQ+GDPATSKGPVER V RI+TPGT++D AL
Sbjct: 62  SIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEAL 121

Query: 127 LDEKRDTLLMALTGGRGVWGLAWLNLASGEFRVSEV-ATEKLAATLERIRPAEVLLPDSL 185
           LDE+RD L+ AL G   ++GLA L++ SG F V E+   E L A LER+ P E+L+PD  
Sbjct: 122 LDERRDNLIAALLGDERLFGLAVLDITSGNFSVQEIKGWENLLAELERLNPVELLIPDDW 181

Query: 186 VPEVNISA--ATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAAGALLQYA 243
             ++         RR  W FD ++A++ L + F  + L  F  + L  A+GAAG LL YA
Sbjct: 182 PRDLPAEKRPGARRRAPWDFDRDSARKALCQQFATKDLKGFGCDKLTLAIGAAGCLLTYA 241

Query: 244 QATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFSLLDSCITAMGA 303
           + TQ  ALPH++ L  ER    + LD A+RRNLEL   L G    TL S++D C TAM +
Sbjct: 242 KETQRTALPHLRSLRHERLDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMAS 301

Query: 304 RYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVERIAGRIALRNA 363
           R L   L+ P RD  V  AR D+I  L+  +    + L+  LK   D+ERI  RI LRNA
Sbjct: 302 RLLSRWLNRPLRDLKVLQARQDSIRCLLDSYRF--EKLQPQLKEIGDIERILARIGLRNA 359

Query: 364 RPRDLSSLRDSLACLEELRRPLAGHPSPLLGELWGQLEAPVEAIELLLRAIAQEPAAMVR 423
           RPRDL+ LRD+L  L EL+  +    +P L  L        E   LL RAI   P A++R
Sbjct: 360 RPRDLARLRDALGALPELQNAMTELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIR 419

Query: 424 DGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEYNRVHGFYIEVTHA 483
           DGGV+  G+D ELDEL A+++N G FL+DLEAREK RTG+A LKV YNRVHG++IE+   
Sbjct: 420 DGGVLKAGYDNELDELLAISENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELPTK 479

Query: 484 NADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKWLYEQVLDQLQPVVP 543
            A++ P DY RRQTLK AER+ITPELKAFEDKALSA+ RALAREK LY+ +L+ L   + 
Sbjct: 480 QAEQAPGDYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYDALLETLISHLA 539

Query: 544 QLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGRHPVVENELQAQGDTFI 603
            LQ  A ALA+LD+L++ A+ A+  +   P F D P L +E GRHPVVE  L      F+
Sbjct: 540 PLQDSAAALAELDVLSNLAERALNLDLNCPRFVDEPCLRIEQGRHPVVEQVLTT---PFV 596

Query: 604 PNDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAHVGCYVPAKAARLGPMDQI 663
            NDL L    D   R+L+ITGPNMGGKSTYMRQTALI LLAH+G +VPA +  L  +D+I
Sbjct: 597 ANDLGL----DNSTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRI 652

Query: 664 FTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVGRGTSTFDGMALAMAILR 723
           FTRIG+SDDLA GRSTFMVEM+E+A ILHNAT++SLVLMDEVGRGTSTFDG++LA A   
Sbjct: 653 FTRIGSSDDLAGGRSTFMVEMSETANILHNATDRSLVLMDEVGRGTSTFDGLSLAWAAAE 712

Query: 724 HLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDRIVFLHAVEEGPANQSYGI 783
            L +  R+ TLFATHYFELT L    P + NVHL+A EH +RIVFLH V  GPA+QSYG+
Sbjct: 713 RLAQL-RAYTLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGL 771

Query: 784 QVAALAGIPSAVVRAAKKELRQLETR--------------AAVDPLQPDLFAAVPAPDEG 829
            VA LAG+P+AV++ A++ L +LET               A   P Q DLFA++P     
Sbjct: 772 AVAQLAGVPTAVIQRAREHLGRLETTSLPHEQPAAHKAKDAPQVPHQSDLFASLP----- 826

Query: 830 PEAPAHPALERLGEIDPDSLSPREALDLLYELKTL 864
                HPA+E+LG++  D ++PR+A+++LY+LK L
Sbjct: 827 -----HPAIEKLGKLQLDDMTPRQAIEMLYQLKNL 856