Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 886 a.a., DNA mismatch repair protein MutS from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  895 bits (2314), Expect = 0.0
 Identities = 499/882 (56%), Positives = 612/882 (69%), Gaps = 39/882 (4%)

Query: 8   DPSGHTPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGLP 67
           D S HTPMMQQYL LK+ HP TLLFYRMGDFYELFF DAEKAARLLDITLT RGQSAG P
Sbjct: 14  DLSQHTPMMQQYLGLKAGHPNTLLFYRMGDFYELFFGDAEKAARLLDITLTQRGQSAGQP 73

Query: 68  IKMAGVPYHAVEQYLAKLVKMGESVVICEQVGDPATSKGPVERAVSRIVTPGTLTDAALL 127
           + MAGVP+H+V+ YLA+L+K+GESV ICEQVGD AT+KGPVER V R+VTPGTLTD+ LL
Sbjct: 74  VIMAGVPFHSVDTYLARLIKLGESVAICEQVGDVATAKGPVERKVVRVVTPGTLTDSELL 133

Query: 128 DEKRDTLLMAL-TGGRGVWGLAWLNLASGEFRVSEVATEKLAATLERIRPAEVLLPDSLV 186
            +K + +LMA+  G R   GLAW+++  G   +++ A+++LA  + R+ P EVL      
Sbjct: 134 SDKSEAVLMAVHPGARTGCGLAWMSVTQGIVFLAQCASDELADWVARVSPGEVLYSADAT 193

Query: 187 P--EVNISAATTR------------RPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPA 232
           P  E ++ A  ++            RP W FDA   +R LLE  +  SL A+ A+D+  +
Sbjct: 194 PAFEKSVQALASQSGSNGGRLVAVLRPAWAFDAALGQRKLLEQLQAASLAAWDAQDMPDS 253

Query: 233 LGAAGALLQYAQATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFS 292
             AA ALL YA+ TQ +AL HV  L V R    + L   TRRNLELT+TLRGE SPTLFS
Sbjct: 254 HAAAAALLNYAEHTQGRALTHVSSLQVARSGERIDLPLNTRRNLELTQTLRGETSPTLFS 313

Query: 293 LLDSCITAMGARYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVE 352
           LLD C T MG+R LR  L  PRRDRA   AR+ AI  L      L Q LR  LKG +DVE
Sbjct: 314 LLDVCCTGMGSRALRSWLLEPRRDRAEARARLAAIDTLRG---GLWQSLRQSLKGASDVE 370

Query: 353 RIAGRIALRNARPRDLSSLRDSLACLEELRRPLAGHPSP-----LLGELWGQLEAPVEAI 407
           RI  R ALR  +PR+L  L  +L    E  R LA    P     LL  +   L  P    
Sbjct: 371 RITARTALRQVKPRELVGLGQTL----ERARQLAAQLGPQAAGGLLHGIASHLTPPDGCA 426

Query: 408 ELLLRAIAQEPAAMVRDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLK 467
            LL  A+  EPAA+VRDGGV+A GFDAELDELR + ++  AFL++LE RE+ RTGIA L+
Sbjct: 427 VLLRDALLPEPAALVRDGGVIADGFDAELDELRGIQNHSDAFLIELEQRERTRTGIANLR 486

Query: 468 VEYNRVHGFYIEVTHANADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALARE 527
           V++N+VHGFYIEVT   A KVPDDYRRRQTLKNAER+ITPELKAFEDKALSAQDRALARE
Sbjct: 487 VQFNKVHGFYIEVTQGQASKVPDDYRRRQTLKNAERFITPELKAFEDKALSAQDRALARE 546

Query: 528 KWLYEQVLDQLQPVVPQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGR 587
           KWLY+ +LD+LQ  +P L  +ARA+A LD L +  + A+  NWC P+F   P + +  GR
Sbjct: 547 KWLYDHLLDELQAYIPPLTQLARAMAALDALCALTERALTLNWCAPQFVPEPCIDIRGGR 606

Query: 588 HPVVENEL-QAQGDTFIPNDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAHV 646
           HPVVE  L ++ G +FI ND  +G     ++R+ +ITGPNMGGKSTYMRQ A+I LLA +
Sbjct: 607 HPVVEARLNESSGGSFIANDTVMG----PKQRMQVITGPNMGGKSTYMRQVAVIVLLASM 662

Query: 647 GCYVPAKAARLGPMDQIFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVG 706
           G +VPA + RLGP+D I TRIGA+DDLA+ +STFMVEMTE+A IL+ AT +SLVLMDE+G
Sbjct: 663 GSHVPATSCRLGPIDAIHTRIGAADDLANAQSTFMVEMTEAAQILNAATPESLVLMDEIG 722

Query: 707 RGTSTFDGMALAMAILRHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDR- 765
           RGTSTFDG+ALA  I  HL +K+R+ TLFATHYFELT     + A VNVH+ AVE G + 
Sbjct: 723 RGTSTFDGLALAGGIATHLHDKSRAYTLFATHYFELTEFPASHHAAVNVHVSAVESGGKG 782

Query: 766 ---IVFLHAVEEGPANQSYGIQVAALAGIPSAVVRAAKKELRQLETRAAVDPLQPDLFAA 822
              IVFLH +E GPA++SYGIQVA LAG+P+ VV+ A+  L  LE ++     Q DLFA 
Sbjct: 783 GGGIVFLHQIEPGPASRSYGIQVARLAGVPAGVVQHARHALAALEAQSEESRSQVDLFAP 842

Query: 823 VPAPDEGPEAPAHPALERLGEIDPDSLSPREALDLLYELKTL 864
            PA  E PE  AHP    + +IDPD+LSPREAL+ LY LK L
Sbjct: 843 PPATLE-PE--AHPLQAAVAQIDPDTLSPREALEQLYALKKL 881