Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 855 a.a., DNA mismatch repair protein MutS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  831 bits (2146), Expect = 0.0
 Identities = 453/865 (52%), Positives = 592/865 (68%), Gaps = 22/865 (2%)

Query: 6   NSDPSGHTPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAG 65
           + D S HTPMMQQYL LK+QHP  LLFYRMGDFYELF++DA++A++LLDI+LT RG SAG
Sbjct: 6   DKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAG 65

Query: 66  LPIKMAGVPYHAVEQYLAKLVKMGESVVICEQVGDPATSKGPVERAVSRIVTPGTLTDAA 125
            PI MAG+P+HAVE YLAKLV  GESV ICEQ+GDPATSKGPVER V RIVTPGT++D A
Sbjct: 66  EPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEA 125

Query: 126 LLDEKRDTLLMALTGGRGVWGLAWLNLASGEFRVSEVAT-EKLAATLERIRPAEVLLPDS 184
           LL E++D LL A+      +G A L+++SG FR+SE A  E +AA L+R  PAE+L  + 
Sbjct: 126 LLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAED 185

Query: 185 LVPEVNISA--ATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAAGALLQY 242
                 I       RRP W F+ + A++ L   F  + L  F  E+    L AAG LLQY
Sbjct: 186 FAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGCLLQY 245

Query: 243 AQATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFSLLDSCITAMG 302
            + TQ  +LPH++ + +ER+   + +DAATRRNLE+T+ L G    TL ++LD  +T MG
Sbjct: 246 VKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTVTPMG 305

Query: 303 ARYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVERIAGRIALRN 362
           +R L+  LH P R+  +   R   IGAL      L   LR       D+ERI  R+ALR 
Sbjct: 306 SRMLKRWLHMPVRNTDILRERQQTIGALQDTVSELQPVLRQ----VGDLERILARLALRT 361

Query: 363 ARPRDLSSLRDSLACLEELRRPLAGHPSPLLGELWGQLEAPVEAIELLLRAIAQEPAAMV 422
           ARPRDL+ +R +   L EL   L    S  +  L  ++    E  +LL RAI   P  +V
Sbjct: 362 ARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMGDFAELRDLLERAIIDAPPVLV 421

Query: 423 RDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEYNRVHGFYIEVTH 482
           RDGGV+A G+  ELDE RAL D    +L  LE RE+ERTG+ TLKV YN VHG+YI+++ 
Sbjct: 422 RDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISR 481

Query: 483 ANADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKWLYEQVLDQLQPVV 542
             +   P +Y RRQTLKNAERYI PELK +EDK L+++ +ALA EK LY+++ D L P +
Sbjct: 482 GQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHL 541

Query: 543 PQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGRHPVVENELQAQGDTF 602
             LQ  A ALA+LD+L + A+ A   N+  P FTD+PG+ +  GRHPVVE   Q   + F
Sbjct: 542 ADLQQSANALAELDVLVNLAERAWTLNYTCPTFTDKPGIRITEGRHPVVE---QVLNEPF 598

Query: 603 IPNDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAHVGCYVPAKAARLGPMDQ 662
           I N L+L      +RR+L+ITGPNMGGKSTYMRQTALIALLA++G YVPA+   +GP+D+
Sbjct: 599 IANPLNLSP----QRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDR 654

Query: 663 IFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVGRGTSTFDGMALAMAIL 722
           IFTR+GA+DDLASGRSTFMVEMTE+A ILHNATE SLVLMDE+GRGTST+DG++LA A  
Sbjct: 655 IFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACA 714

Query: 723 RHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDRIVFLHAVEEGPANQSYG 782
            +L  K ++LTLFATHYFELT+L  +   + NVHLDA+EHGD I F+H+V++G A++SYG
Sbjct: 715 ENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYG 774

Query: 783 IQVAALAGIPSAVVRAAKKELRQLET---RAAVDPLQPDLFAAVPAPDEGPEAPAHPALE 839
           + VAALAG+P  V++ A+++LR+LE+    AA   +     + + AP+E       PA+E
Sbjct: 775 LAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLAAPEE-----TSPAVE 829

Query: 840 RLGEIDPDSLSPREALDLLYELKTL 864
            L  +DPDSL+PR+AL+ +Y LK+L
Sbjct: 830 ALENLDPDSLTPRQALEWIYRLKSL 854