Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 853 a.a., methyl-directed mismatch repair protein from Escherichia coli BL21

 Score =  838 bits (2164), Expect = 0.0
 Identities = 459/870 (52%), Positives = 596/870 (68%), Gaps = 24/870 (2%)

Query: 1   MATKKNSDPSGHTPMMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTR 60
           M+  +N D   HTPMMQQYL LK+QHP  LLFYRMGDFYELF++DA++A++LLDI+LT R
Sbjct: 1   MSAIENFD--AHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKR 58

Query: 61  GQSAGLPIKMAGVPYHAVEQYLAKLVKMGESVVICEQVGDPATSKGPVERAVSRIVTPGT 120
           G SAG PI MAG+PYHAVE YLAKLV  GESV ICEQ+GDPATSKGPVER V RIVTPGT
Sbjct: 59  GASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGT 118

Query: 121 LTDAALLDEKRDTLLMALTGGRGVWGLAWLNLASGEFRVSEVAT-EKLAATLERIRPAEV 179
           ++D ALL E++D LL A+      +G A L+++SG FR+SE A  E +AA L+R  PAE+
Sbjct: 119 ISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAEL 178

Query: 180 LLPDSLVPEVNISA--ATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAAG 237
           L  +       I       RRP W F+ + A++ L   F  + L  F  E+    L AAG
Sbjct: 179 LYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAG 238

Query: 238 ALLQYAQATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFSLLDSC 297
            LLQYA+ TQ   LPH++ + +ERE   + +DAATRRNLE+T+ L G A  TL S+LD  
Sbjct: 239 CLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRNLEITQNLAGGAENTLASVLDCT 298

Query: 298 ITAMGARYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVERIAGR 357
           +T MG+R L+  LH P RD  V   R   IGAL      L   LR       D+ERI  R
Sbjct: 299 VTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDFTAGLQPVLRQ----VGDLERILAR 354

Query: 358 IALRNARPRDLSSLRDSLACLEELRRPLAGHPSPLLGELWGQLEAPVEAIELLLRAIAQE 417
           +ALR ARPRDL+ +R +   L ELR  L    S  +  L  ++    E  +LL RAI   
Sbjct: 355 LALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQALREKMGEFAELRDLLERAIIDT 414

Query: 418 PAAMVRDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEYNRVHGFY 477
           P  +VRDGGV+A+G++ ELDE RAL D    +L  LE RE+ERTG+ TLKV +N VHG+Y
Sbjct: 415 PPVLVRDGGVIASGYNEELDEWRALADGATDYLERLEVRERERTGLDTLKVGFNAVHGYY 474

Query: 478 IEVTHANADKVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKWLYEQVLDQ 537
           I+++   +   P +Y RRQTLKNAERYI PELK +EDK L+++ +ALA EK LYE++ D 
Sbjct: 475 IQISRGQSHLAPINYMRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYEELFDL 534

Query: 538 LQPVVPQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGRHPVVENELQA 597
           L P +  LQ  A ALA+LD+L + A+ A   N+  P F D+PG+ +  GRHPVVE   Q 
Sbjct: 535 LLPHLEALQQSASALAELDVLVNLAERAYTLNYTCPTFIDKPGIRITEGRHPVVE---QV 591

Query: 598 QGDTFIPNDLDLGESEDAERRLLLITGPNMGGKSTYMRQTALIALLAHVGCYVPAKAARL 657
             + FI N L+L      +RR+L+ITGPNMGGKSTYMRQTALIAL+A++G YVPA+   +
Sbjct: 592 LNEPFIANPLNLSP----QRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEI 647

Query: 658 GPMDQIFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVGRGTSTFDGMAL 717
           GP+D+IFTR+GA+DDLASGRSTFMVEMTE+A ILHNATE SLVLMDE+GRGTST+DG++L
Sbjct: 648 GPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMDEIGRGTSTYDGLSL 707

Query: 718 AMAILRHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDRIVFLHAVEEGPA 777
           A A   +L  K ++LTLFATHYFELT+L  +   + NVHLDA+EHGD I F+H+V++G A
Sbjct: 708 AWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAA 767

Query: 778 NQSYGIQVAALAGIPSAVVRAAKKELRQLET---RAAVDPLQPDLFAAVPAPDEGPEAPA 834
           ++SYG+ VAALAG+P  V++ A+++LR+LE+    AA   +     + +  P+E      
Sbjct: 768 SKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLSVPEE-----T 822

Query: 835 HPALERLGEIDPDSLSPREALDLLYELKTL 864
            PA+E L  +DPDSL+PR+AL+ +Y LK+L
Sbjct: 823 SPAVEALENLDPDSLTPRQALEWIYRLKSL 852