Pairwise Alignments

Query, 867 a.a., DNA mismatch repair protein MutS from Dechlorosoma suillum PS

Subject, 883 a.a., DNA mismatch repair protein, MutS family from Agrobacterium fabrum C58

 Score =  583 bits (1504), Expect = e-170
 Identities = 358/879 (40%), Positives = 509/879 (57%), Gaps = 33/879 (3%)

Query: 15  MMQQYLALKSQHPGTLLFYRMGDFYELFFEDAEKAARLLDITLTTRGQSAGLPIKMAGVP 74
           MM+QY+ +K+ +PG+LLFYRMGDFYELFF+DA +A+R L ITLT RGQ  G  I M GVP
Sbjct: 1   MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP 60

Query: 75  YHAVEQYLAKLVKMGESVVICEQVGDPAT-----SKGPVERAVSRIVTPGTLTDAALLDE 129
            HA + YL KL+  G  V +CEQ+ DPA      SK  V+R V R+VTPGTLT+  LL  
Sbjct: 61  VHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP 120

Query: 130 KRDTLLMALTGGRGV----WGLAWLNLASGEFRVSEVATEKLAATLERIRPAEVLLPDSL 185
                LMAL   RG     + LAW+++++G FR++E    +L A + RI P E+++ DSL
Sbjct: 121 TESNYLMALARIRGSAEAQFALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVADSL 180

Query: 186 VPEVNI-------SAATTRRPDWHFDAEAAKRLLLEHFKVQSLTAFAAEDLRPALGAAGA 238
             +  +             +P   FD+  A+  +  +F V +L  F     R  + AA A
Sbjct: 181 FHDEELRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFS-RVEMAAAAA 239

Query: 239 LLQYAQATQTQALPHVQGLMVERESAYLGLDAATRRNLELTETLRGEASPTLFSLLDSCI 298
            + Y + TQ    P +     E  ++ L +D ATR NLEL +TL G+   +L   L+  +
Sbjct: 240 AVAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLHALNRTV 299

Query: 299 TAMGARYLRHALHHPRRDRAVPAARIDAIGALMADHLALAQYLRSGLKGFADVERIAGRI 358
           T  GAR L   L  P  D     AR+DA+ A + D ++L   LR  LK  AD+ R   R+
Sbjct: 300 TGGGARLLAERLMSPLTDPERINARLDAV-AYLIDDVSLCDGLRDALKHVADMPRALSRL 358

Query: 359 ALRNARPRDLSSLRDSLACLEELRRPLAGHPSP-LLGELWGQLEAPVEAIELLLRA-IAQ 416
           AL    PRDL ++R  L   E++   L G   P  L +    L+A   A+E +L + +A 
Sbjct: 359 ALERGGPRDLGAIRQGLVSAEKIAVILDGGLLPDELAKALRDLKALPGALEAMLGSMLAD 418

Query: 417 EPAAMVRDGGVMATGFDAELDELRALNDNCGAFLVDLEAREKERTGIATLKVEYNRVHGF 476
           +   + RDGG +  G + ELDE+RAL D     +  L+ +  + TGI +LK+++N V G+
Sbjct: 419 DLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLKIKHNNVLGY 478

Query: 477 YIEVTHANAD------KVPDDYRRRQTLKNAERYITPELKAFEDKALSAQDRALAREKWL 530
           +IEVT  NAD      +    +  RQT+  A R+ T EL   E +  +A   AL  E   
Sbjct: 479 FIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEA 538

Query: 531 YEQVLDQLQPVVPQLQAVARALAQLDMLASFADTAVARNWCRPEFTDRPGLWLEAGRHPV 590
           +E++++ +      ++A A ALA +D+ +S A  A  + +CRP         ++ GRHPV
Sbjct: 539 FERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKGGRHPV 598

Query: 591 VENELQAQG-DTFIPNDLDLGESEDAERRLL-LITGPNMGGKSTYMRQTALIALLAHVGC 648
           VE  L+ Q    FI N+ DL      +   + L+TGPNMGGKST++RQ ALIA+LA +G 
Sbjct: 599 VEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQIGS 658

Query: 649 YVPAKAARLGPMDQIFTRIGASDDLASGRSTFMVEMTESAAILHNATEQSLVLMDEVGRG 708
           +VPA+AA +G +D++F+R+GASDDLA GRSTFMVEM E+AAIL+ AT++SLV++DE+GRG
Sbjct: 659 FVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRG 718

Query: 709 TSTFDGMALAMAILRHLLEKNRSLTLFATHYFELTRLAHEYPALVNVHLDAVEHGDRIVF 768
           T+TFDG+++A A + HL E NR   LFATH+ ELT L+ +   L N  +   E    ++F
Sbjct: 719 TATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWEGDVIF 778

Query: 769 LHAVEEGPANQSYGIQVAALAGIPSAVVRAAKKELRQLETRAAVDPLQP-----DLFAAV 823
           LH V  G A++SYGIQVA LAG+P++VV  A++ L +LE     +P         LF   
Sbjct: 779 LHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDDLPLFQIA 838

Query: 824 PAPDEGPEAPAHPALERLGEIDPDSLSPREALDLLYELK 862
              +E  +A      E L   +PD ++PREALD LY LK
Sbjct: 839 VRREETRKAGPSKVEEALKSFNPDEMTPREALDALYALK 877