Pairwise Alignments

Query, 1279 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  296 bits (758), Expect = 6e-84
 Identities = 191/551 (34%), Positives = 300/551 (54%), Gaps = 24/551 (4%)

Query: 512  IGEERRILAE----MAQAKALAEAAAQAKADFLANMSHEIRTPMNAVIGMTHLALKTDLD 567
            +GE +R + E    +++  A + A   AKA+FLA +SHEIRTPMN V+GMT L L T L 
Sbjct: 371  LGERQRAIVEARFSLSRDLAASNAEIAAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLS 430

Query: 568  ERQREYLRKIQHSSQHLLGIINDILDFSKSEAGKLHIEQIDFDLEKVLEDVSSLMSERAT 627
             +QR+Y++ I  +   LL +IN+ILD SK E+G++ ++ + FDL  ++ED  S+   +A 
Sbjct: 431  VKQRDYVQTIHSAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAE 490

Query: 628  SKGLEFVIEMADEVPRHLVGDPLRIGQVLINYASNAVKFTERGEVAIHVGLEEDQGQEVL 687
             + +E +  +  +VPR + GDP R+ Q +++   NA++ T+ GEV I V L +D+  +  
Sbjct: 491  QQNVELISFIQPQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVAL-DDRSTKPR 549

Query: 688  LRFAVHDTGIGIKAGELPTLFNSFQQADS--STTRKYGGTGLGLVIAKRLAELMGGQVGA 745
            LR AV D+G+ ++A E   L +S   + +  S TR  G   LGLVIA++L  LM G+ G 
Sbjct: 550  LRIAVQDSGLPMEAAERDALLHSELHSKNFFSATRLNG--HLGLVIARQLILLMNGEFGI 607

Query: 746  ESEPGRGSTFWFTARLGRSSNARHRAPPRPDLRTRRLLVVDDHDHARDVVCDMLRSMSFQ 805
            +S   +GST W T  L         +     L+  R+LVVDD+D  R V+     +    
Sbjct: 608  KSGSHQGSTLWLTLPLDPERLEHPTSDLDGPLKGARVLVVDDNDTCRKVLVQQCSAWGLN 667

Query: 806  VSDTDSGNRCLAELQRASAAGEPYDIVFLDWQMPEMDGLATAREIRR-LELPQPPLVLMI 864
            VS   SG   LA L+  +   + +D+V LD  MP M G+  A +I+    L    L++M+
Sbjct: 668  VSAVPSGKEALALLRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIML 727

Query: 865  TAYGRDE---LARSAGESGLQGIEEILIKPVSPSQLFNTVMRILDHEDGPHSAADP--EA 919
            T         +AR+       GI+ IL KPV+   L  T+   L      +    P    
Sbjct: 728  TGISNAPSKIIARNC------GIKRILAKPVAGYTLKTTLADELTQRSKGNVPPRPVLNT 781

Query: 920  LPDLAPLAGLRVLLVEDNQLNQEVASEFLAGANMVVDVADDGASALEKVRQQRYDVILMD 979
               +      R+L+ EDN ++ +V    L   N+  D A +G  ALE ++ QRYD++LMD
Sbjct: 782  PAAITVPTDFRILVAEDNSISTKVIRGMLGKLNLNPDTASNGEEALEAMKAQRYDLVLMD 841

Query: 980  MQMPVMDGIAATREIRR---QFPAAVLPILAMTANAMEQDRERCLAAGMNDHIAKPVDPR 1036
             +MP++DG +AT+++R           P++A+TA+ + + +ER   AGM+ H+AKPV+  
Sbjct: 842  CEMPILDGFSATQQLRAWEVSHQRVRTPVVALTAHILSEHKERARQAGMDGHMAKPVELS 901

Query: 1037 DLLGKLLKWLA 1047
             L   +  W+A
Sbjct: 902  QLRELVEFWVA 912