Pairwise Alignments

Query, 277 a.a., squalene synthase HpnD from Dechlorosoma suillum PS

Subject, 304 a.a., Squalene synthase (EC 2.5.1.21) from Variovorax sp. SCN45

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 70/270 (25%), Positives = 106/270 (39%), Gaps = 45/270 (16%)

Query: 11  AAASGSSFTISFTLLPREKKQAMTALYAFCREVDDVVDEVE-DPQVAAIKLAWWRQEVER 69
           A A   +F ++  L P   +  + A+Y F R  DD+ DE E  P     +L  +R+E+  
Sbjct: 10  APAHYENFPVASWLCPPHLRPPIAAIYHFARTADDIADEGEASPDQRLAELRAYREELAA 69

Query: 70  LYDG----TPQHP-VAQALAEVIKTIPLDKELLLEIIDGMEMDLTQAR----YADFKSLQ 120
              G    + + P V   L   I    L ++LL +++     D+ + R    YAD   L 
Sbjct: 70  AAQGEVLASSRWPHVFGPLVHSIAQYKLPEDLLADLLSAFMQDIEKTRDHGTYADRAELL 129

Query: 121 LYCYRVASVVGLLSAEIFGMTQRATRKYAHDLGMAFQLTNIIRDVGEDARRGRIYLPMDE 180
            YC R A+ VG L   ++ +        +  +  A QL N  +D G D  RGR Y P+ +
Sbjct: 130 DYCRRSANPVGRLLLHLYDVHDAQALAQSDAICSALQLINFWQDPGVDLPRGRFYFPLTD 189

Query: 181 LQRFNVPAADILNSRPTEAFAALMQFQIERARGFYEQAFAALPAADRRQQKPGLVMAAIY 240
             R  +   +                          + FA L  A   Q+   L+    Y
Sbjct: 190 CDRRGLTRENF-------------------------KVFAPLSPAPPPQEAINLIAVMSY 224

Query: 241 --RSLLEEIAAEPELVLTHRISIPPGRKAW 268
             R L+ E A      L HR+   PGR  W
Sbjct: 225 WARELMTEGAP-----LVHRL---PGRAGW 246