Pairwise Alignments

Query, 792 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 800 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 8e-34
 Identities = 123/380 (32%), Positives = 176/380 (46%), Gaps = 51/380 (13%)

Query: 255 GQVRHLLISVDLVFLDSERYLQWTL-------LDVTENRRSQALASRNEILTNAIMNSLD 307
           G +  LL+SV L  L S+R     L       L V+E    Q+L   +  L + +  +  
Sbjct: 324 GGLLSLLLSVLLYSLFSQRQRALALVAQRTAELQVSE----QSLRGTHNQLRSVLDAATQ 379

Query: 308 VAVAVLDREGNILRTNRKWSEFALGNGAGEELAAGVGLNYFEVCRRSFPEASATE----- 362
           VA+   + +G ++ T    +E  LG  A E +   + L    +       A A       
Sbjct: 380 VAIIATNLKG-VVSTFNAGAERMLGYAASEAIGR-LRLEDLVLPEELNLRAQALSLRFGR 437

Query: 363 ALAGMQAVLEERLPVASIEYPCHGPAGERWYLLQATPLGSGL------------QGL--- 407
           A+AG QA+  E +         HG     W LL+A   GS L            QGL   
Sbjct: 438 AIAGGQAMFAETVQE-------HGAEPGEWTLLRAD--GSQLVANMLVTAMLDEQGLWVG 488

Query: 408 -VTIHMDITARRQAEEGLRQRLMLQDKLARVAASVPGVIYSIKLRPDGTFCIPYAMQGSV 466
            + I +D+T RR+  E L  R  L +KL+   A VPG IY  +L  +G  C PYA  G  
Sbjct: 489 YLAICIDVTERRRVHEALAARDRLLEKLS---AEVPGGIYQYRLDANGHSCFPYASMGLY 545

Query: 467 DIFGLRPEDLTEDLTEDLGPVLSRIHGADQERVLAVVLESARTMAPWHCEFRVHHPQGGV 526
           DI+ +   DL + L ED   V  RIH  D ERV   V  SA  ++PW  E+RV  P+ G+
Sbjct: 546 DIYEI---DLMQ-LREDASAVFERIHPDDLERVRRSVRYSAEHLSPWREEYRVCLPRAGL 601

Query: 527 RWVESKAVPRLEDDGCVIWHGYIHDVSARKQADAELMRSRDQLRALNEGLQRVREEERSR 586
           RWV  +A P + + GC +WHGY+ D+S  K  + EL R+     +L     R   +ER +
Sbjct: 602 RWVRGEATPEVGEQGCTLWHGYLTDISDLKGVEEEL-RALSVTDSLTGIHNRRYFQERLK 660

Query: 587 ISLEIHDQLGQSLTVLKLEM 606
           I LE   + G  L V+ L++
Sbjct: 661 IELERAQRDGLPLAVIMLDI 680



 Score = 27.7 bits (60), Expect = 0.003
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 89  ECVVPEDRERIRRIWLHPPTTAAPGTVEFRVGDSHRGLRHLSLSSGLPGRGGKRRRRSGA 148
           E + P+D ER+RR   +     +P   E+RV     GLR +      P  G     +   
Sbjct: 564 ERIHPDDLERVRRSVRYSAEHLSPWREEYRVCLPRAGLRWVR-GEATPEVG----EQGCT 618

Query: 149 MAMGTLQDVTERKKVEIALR 168
           +  G L D+++ K VE  LR
Sbjct: 619 LWHGYLTDISDLKGVEEELR 638