Pairwise Alignments

Query, 792 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 840 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score = 94.0 bits (232), Expect = 3e-23
 Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 14/286 (4%)

Query: 9   LTALILVGIGWSCSLLLLDRETIPRLLSSLNLGRLLHLSLESSDLGIWCYEHQQDRIFLD 68
           L AL+  G+       L +R+ + + L++        +  E S +G++  + +   ++ +
Sbjct: 328 LLALVTFGLAMVSDRRLAERQRVQQALAASEAR--YRMLTEHSPVGVFQADAEGTCLYAN 385

Query: 69  GRASLLLGLPTRAARLAEFLECVVPEDRERIRRIWLHPPTTAAPGTVEFRVGDSHRGLR- 127
            R   L G         ++ + V P+DRE +  +W            E R+      +R 
Sbjct: 386 ERWLELAGRGRSELLGEKWCQVVHPDDREAVAALWRGHVNGQGEFLAEMRLMRGDGAIRW 445

Query: 128 ---HLSLSSGLPGRGGKRRRRSGAMAMGTLQDVTERKKVEIALRESEARFSTIFRTCPAG 184
              H +  S   G  G          +GT++D+T  K+ E  LR SE +F+  FR  P  
Sbjct: 446 VRGHAAALSVEEGPAGG--------LVGTIEDITAAKEAERRLRLSEEKFAKAFRASPDA 497

Query: 185 IALCRVADGSLVDVNPAFLHIYGLERQEVIGMTSFALHLWGSPQQREVALASILIDGRGY 244
           + +    DG  +D+N AF  + G  R +++G T+  + +W  P+ R   + +   DG+  
Sbjct: 498 MVISLTEDGRYIDLNDAFADMLGYSRLDLMGHTALGMGVWADPEDRARLVEAARRDGQVV 557

Query: 245 QSERSIRRPDGQVRHLLISVDLVFLDSERYLQWTLLDVTENRRSQA 290
             E  +RR +G+V   LI+V  V LD    L +   DV+E +  +A
Sbjct: 558 NFETRLRRKNGEVFDTLIAVQKVVLDDLDCLLFICRDVSERKAMEA 603



 Score = 46.2 bits (108), Expect = 7e-09
 Identities = 122/523 (23%), Positives = 193/523 (36%), Gaps = 76/523 (14%)

Query: 282 VTENRRSQALASRNEILTNAIMNSLDVAVAVLDREGNILRTNRKWSEFALGNGAGEELAA 341
           + E +R Q   + +E     +     V V   D EG  L  N +W E A G G  E L  
Sbjct: 344 LAERQRVQQALAASEARYRMLTEHSPVGVFQADAEGTCLYANERWLELA-GRGRSELL-- 400

Query: 342 GVGLNYFEVCRRSFPEASAT----EALAGMQAVLEERLPVASIEYPCHGPAGERWYLLQA 397
             G  + +V      EA A           + + E RL          G    RW    A
Sbjct: 401 --GEKWCQVVHPDDREAVAALWRGHVNGQGEFLAEMRL--------MRGDGAIRWVRGHA 450

Query: 398 TPLG---SGLQGLVTIHMDITARRQAEEGLRQRLMLQDKLARVAASVPGVIYSIKLRPDG 454
             L        GLV    DITA ++AE  LR   + ++K A+   + P  +  I L  DG
Sbjct: 451 AALSVEEGPAGGLVGTIEDITAAKEAERRLR---LSEEKFAKAFRASPDAMV-ISLTEDG 506

Query: 455 TFCIPYAMQGSVDIFGLRPEDLTEDLTEDLGPVLSRIHGADQERVLAVVLESARTMAPWH 514
            +          D+ G    DL       +G        AD E    +V  + R     +
Sbjct: 507 RYI--DLNDAFADMLGYSRLDLMGHTALGMGV------WADPEDRARLVEAARRDGQVVN 558

Query: 515 CEFRVHHPQGGVRWVESKAVPR--LEDDGCVIWHGYIHDVSARKQADAELMRSRDQLRAL 572
            E R+    G V +    AV +  L+D  C+++     DVS RK  +A   RSR+ L  L
Sbjct: 559 FETRLRRKNGEV-FDTLIAVQKVVLDDLDCLLF--ICRDVSERKAMEA---RSRELLVRL 612

Query: 573 NEGLQRVREEERSRISLEIHDQLGQSLTVLKLEMAWLRARLLGGQAEEKTRLQEVGRLID 632
           +        +E  + +      L + L ++      +  R  G   ++      +  L+D
Sbjct: 613 D-----ASNKELEQFAYVTSHDLQEPLRMIAGYAQLIERRYRGRLDDDADEF--IAFLVD 665

Query: 633 DTLRAVRTISWDLRPGILDTLG---LGAGVEWLVDDFRRRLGIRCNVVVPR-ERLELPDV 688
              R    I   L    ++ LG      G+  ++DD    LG        R E   +P V
Sbjct: 666 GAKRMQAMIRDLLEYSRVERLGGQFESFGMGEVLDDVMANLGAALTETGGRIEVGPMPQV 725

Query: 689 LA--THLFRICQELLTNVARHAQANR---IDVSLGLADGRVLLEVRDNGRGMPMLPAH-- 741
            A  + + R+ Q L+ N  ++   +R   + V+     G  ++ V DNG G+   PA+  
Sbjct: 726 TADRSQMLRLLQNLIGNALKYRSPDRQPVVTVTAEPGAGGWVISVADNGIGIE--PAYFD 783

Query: 742 ----------------GHSLGLLGIKERAAQCGGEVHIATRPE 768
                           G  +GL   K+   + GG + + + P+
Sbjct: 784 RIFLVFQRLHTREHYDGTGIGLAICKKIVERHGGRIWVESEPD 826