Pairwise Alignments

Query, 650 a.a., DNA helicase, Rad3 from Dechlorosoma suillum PS

Subject, 636 a.a., putative ATP-dependent DNA helicase YoaA from Escherichia coli ECOR27

 Score =  528 bits (1359), Expect = e-154
 Identities = 289/632 (45%), Positives = 389/632 (61%), Gaps = 6/632 (0%)

Query: 15  FEPGGPLSANIPGYRTRSQQVEMAEKIAAAIADNRMLVAEAGTGTGKTYAYLVPALLSGG 74
           F P G L+  IPG++ R  Q +MA  +  AI   + LV EAGTGTGKTYAYL PAL +  
Sbjct: 5   FAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVEAGTGTGKTYAYLAPALRAKK 64

Query: 75  KVIVSTGTKTLQDQLFNKDIPTVRAALKAPVKVALLKGRANYVCPYHLDRSLLDGRFQNR 134
           KVI+STG+K LQDQL+++D+PTV  ALK    VALLKGR+NY+C   L++  L G     
Sbjct: 65  KVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQALAGGDLPV 124

Query: 135 EDVAYIQKIARFAKETRSGDKAECLDVPENATAWIMATSTRENCLGQECPHHKECFVLQA 194
           + ++ +  +  ++ +T  GD + C+ V E++ AW + TST +NCLG +CP +K+CFV++A
Sbjct: 125 QILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLGSDCPMYKDCFVVKA 184

Query: 195 RKEALSADVVVVNHHLFFADVMLKDEGMAELLPACNAVIFDEAHQLPETASLFFGDSFST 254
           RK+A+ ADVVVVNHHLF AD+++K+ G  EL+P  + +IFDEAHQLP+ AS +FG S S+
Sbjct: 185 RKKAMDADVVVVNHHLFLADMVVKESGFGELIPEADVMIFDEAHQLPDIASQYFGQSLSS 244

Query: 255 SQVLDLARDARSEGLASARDCLDLQEATRIVDKAAKDLRLTVAVEPARYAWGQLEGNAQF 314
            Q+LDLA+D         +D   LQ+    + ++A+D RL +     R    +L  N Q 
Sbjct: 245 RQLLDLAKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLANPQI 304

Query: 315 LDGLANLEKELELLNAILENQAERSEGLENCWRRNGELLQRLIQWRQ-EQPGVVRWGEAF 373
                 L+  LEL   + +    RS  L+  + R      RL + ++  QPG   W E  
Sbjct: 305 QRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRTRLKRLKEINQPGYSYWYECT 364

Query: 374 NHSLQLNATPLDVARLFRKQLDGHPRAWIFTSATLAVQADFSHYCNELGLWDAESARWES 433
           +    L  TPL VA  F++ +   P +WIFTSATL+V  D  H+ + LG+  AES    S
Sbjct: 365 SRHFTLALTPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGIEQAESLLLPS 424

Query: 434 PFDYGQQAVLYAPRDIPDPNLPGFTEAVVEAAWPALKACGGGAFFLCTSLRAMRRTHELL 493
           PFDY +QA+L  PR++P  N PG    +     P ++A  G  F LCTS   MR   E  
Sbjct: 425 PFDYSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQF 484

Query: 494 AAKLEDEGLEMPLLLQGEGSKTELLERFRRLGNAVLVGSQSFWEGVDVRGEALSLVVIDK 553
            A +      +P+LLQGE SK +LL++F   GNA+LV + SFWEGVDVRG+ LSLV+IDK
Sbjct: 485 RATMT-----LPVLLQGETSKGQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDK 539

Query: 554 LPFAPPDDPVLKARVEQMEKEGRSAFMEYQLPRAVINVKQGAGRLIRDETDRGVLMICDP 613
           LPF  PDDP+LKAR+E     G   F E QLP AVI +KQG GRLIRD  DRGVL+ICD 
Sbjct: 540 LPFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDN 599

Query: 614 RLITKPYGKRVWRSLPPMKRTRDLIEVLDFYA 645
           RL+ +PYG     SLPP  RTRD+   + F A
Sbjct: 600 RLVMRPYGATFLASLPPAPRTRDIARAVRFLA 631