Pairwise Alignments

Query, 367 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 686 a.a., Protein PilJ from Pseudomonas putida KT2440

 Score =  113 bits (283), Expect = 1e-29
 Identities = 84/235 (35%), Positives = 127/235 (54%), Gaps = 27/235 (11%)

Query: 26  QARAEIQRLEAEAGQWRQ----QAENLEQERQSLGRVFGSLDAFGASL---AGVSQSFVG 78
           Q  A +Q  +  A Q  +    QA  + +  +++G +  S+D   A     A V++  V 
Sbjct: 410 QVAAAVQDTQNTARQLAKASEHQAAQISEASEAVGDMVESIDRVSAHAYESAKVAERSVA 469

Query: 79  LAGHLNQDKLSAAEAAGQALHNRESFARIASNLTSLVEHLGHSSRRVEDLARRAGEIGGI 138
           +A   N+            +HN        + + ++ E +  +++R++ L   + EIG I
Sbjct: 470 IANKGNE-----------VVHNT------INGMDNIREQIQDTAKRIKRLGESSQEIGDI 512

Query: 139 VQLIKEIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAERTTRATVDIGTLVTTI 198
           V LI +IADQTN+LALNAAI+A+ AGEAGRGFAVVADEV++LAER++ AT  I  LV TI
Sbjct: 513 VSLIDDIADQTNILALNAAIQASLAGEAGRGFAVVADEVQRLAERSSSATRQIEALVRTI 572

Query: 199 QTETGAAHDAMQ---AGAGNAARFAADSEAAMRSMEALQGLSAAMEASVDGAALL 250
           Q +T  A  +M+   A     AR A D+  A+  +E +    A +  S+  AA L
Sbjct: 573 QADTNEAVISMEQTTAEVVRGARLAQDAGVALAEIEGVSQNLADLIHSISDAAQL 627



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 7/138 (5%)

Query: 2   LWGKKQRRLAQLEQEVRQWAARDEQARAEIQRL----EAEAGQWRQQAENLEQERQSLGR 57
           L G+  R  A +  EV++ A R   A  +I+ L    +A+  +     E    E     R
Sbjct: 536 LAGEAGRGFAVVADEVQRLAERSSSATRQIEALVRTIQADTNEAVISMEQTTAEVVRGAR 595

Query: 58  VFGSLDAFGASLAGVSQSFVGLAGHLNQDKLSAAEAAGQALHNRESFARIASNLTSLVEH 117
           +        A + GVSQ+   L   ++        +AGQ  H      +I +  ++    
Sbjct: 596 LAQDAGVALAEIEGVSQNLADLIHSISDAAQLQTSSAGQISHTMAVIQQITAQTSA---G 652

Query: 118 LGHSSRRVEDLARRAGEI 135
            G ++  +  LAR A E+
Sbjct: 653 SGATADSIRHLARMASEM 670