Pairwise Alignments

Query, 395 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

Subject, 386 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  272 bits (695), Expect = 1e-77
 Identities = 154/377 (40%), Positives = 227/377 (60%), Gaps = 8/377 (2%)

Query: 2   PQLKKRLIIAAALAGLAGLGGTAAVFYAHAGGAPAMAAPAAASVEVAEVASRPVTDWQSY 61
           P+L   +++   LA LAG+      F + + G      PA  +V VA  ASR +TDW  Y
Sbjct: 8   PKLPLPVLLLGGLA-LAGVAAGVVSFSSTSSGPAGAPPPAGPAVTVATPASRTITDWSEY 66

Query: 62  SGRLEAVERVELRPQVSGVLTAVHFKDGSLVKKGDLLFSIDPRPFAAEVARAQAQLAGAE 121
           +G+  AV+ VE+R +V+G LT VHF DG LV KGDLLF IDPRP+   +A A+A+L  A 
Sbjct: 67  TGQFAAVDYVEIRARVNGYLTEVHFTDGQLVNKGDLLFVIDPRPYEIALASARAKLDQAM 126

Query: 122 ARAAYTGADLARGERLLAENAVSRRDFEEKQNAAREAAATLKAAQAALKVAELNLEYTRI 181
               Y    L+R   L  +  V+    +++   +R A AT++AA+AA++ AELNL++TR+
Sbjct: 127 GTKEYAKRQLSRAGELHRKEFVAESTLDQRTEESRGAGATVEAARAAVRDAELNLQFTRV 186

Query: 182 TAPISGRMSRAEVTVGNLV--APGNAAP--LTTLVSADSIYAAFDVDEQSYLKYVSGSQG 237
           TAPISGR+   +V++GNLV   P  A+P  L+T+VS D I+  FD+ E  YL        
Sbjct: 187 TAPISGRIGAKQVSIGNLVTGGPTVASPTLLSTIVSQDPIHVTFDLTEADYLAQAKRGNA 246

Query: 238 KGLPIRMGLADESGHGREGRLSSVDNRLDSTSGTIRLRAVFDNPDGRLVPGLYARVRLGS 297
            G P+++ L  E+G  REG+L  VDN++D  +GTIR RAV  N +G++  G + RVRL +
Sbjct: 247 VGTPVQLRLMSETGWPREGKLDFVDNQIDKGTGTIRARAVLANAEGQVPSGAFGRVRLAT 306

Query: 298 EAPREAVLVDEKAVGTDQDKRFVLVV-DGKNRTAYREVRLGAVQEGLRVVESGLKAGERI 356
             P  +++V + A+ TDQ ++ V+ V DG      + V LG     LRV+  GL   +++
Sbjct: 307 SVPYTSLMVPDTAIVTDQARKLVMTVKDG--TVVPKPVVLGPKDGELRVIRDGLAPDDQV 364

Query: 357 VVNGLQRVRPGDEVAPQ 373
           ++NGL R RPG +V+ Q
Sbjct: 365 IINGLMRARPGAKVSAQ 381