Pairwise Alignments

Query, 395 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

Subject, 396 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  334 bits (857), Expect = 2e-96
 Identities = 176/382 (46%), Positives = 256/382 (67%), Gaps = 14/382 (3%)

Query: 6   KRLIIAAALAGLAGLGGTAAVFY-----AHAGGAPAMAAPAAASVEVAEVASRPVTDWQS 60
           KR  +  A  GLA      A+F+      +A  A   A   A  V VA+V SR V  W+ 
Sbjct: 6   KRRALTGAGIGLAMSVAAGALFFDLPTSRNATAASTPAETPAIPVTVAKVESRDVMRWEE 65

Query: 61  YSGRLEAVERVELRPQVSGVLTAVHFKDGSLVKKGDLLFSIDPRPFAAEVARAQAQLAGA 120
           +SGRLEAV+RV++R +V+G + AVHF++G+LVK+GD LF+IDP P+ A VA A+ Q+A A
Sbjct: 66  FSGRLEAVDRVQIRSRVAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEGQVASA 125

Query: 121 EARAAYTGADLARGERLLAENAVSRRDFEEKQNAAREAAATLKAAQAALKVAELNLEYTR 180
           EA+ +    +L RG RL     +S+ D +++Q++  +A A L+AA+AAL  A+L+L YT 
Sbjct: 126 EAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSFADAEAQLRAARAALTTAQLDLGYTE 185

Query: 181 ITAPISGRMSRAEVTVGNLVAPGNAAP-LTTLVSADSIYAAFDVDEQSYLKYVS---GSQ 236
           I AP+SGR+ R E+T GNLVA G+ +P LTTLVS + IYA+F+  E    K ++    + 
Sbjct: 186 IIAPVSGRVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASFNASEGVVAKALAELPKTD 245

Query: 237 G-----KGLPIRMGLADESGHGREGRLSSVDNRLDSTSGTIRLRAVFDNPDGRLVPGLYA 291
           G     + +P+ +G   + G   +G L  +DN++DS SGTI +RA+FDNPDGRL+PG + 
Sbjct: 246 GALPALEQIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIGVRAIFDNPDGRLIPGQFV 305

Query: 292 RVRLGSEAPREAVLVDEKAVGTDQDKRFVLVVDGKNRTAYREVRLGAVQEGLRVVESGLK 351
           RVR+G   P   +++ ++A+GTDQDKRFV VVD +N+ +YR+++ GA  +G R+++SGL 
Sbjct: 306 RVRMGEPKPENRIVISDRAIGTDQDKRFVFVVDAENKVSYRQIKPGAPADGQRIIDSGLA 365

Query: 352 AGERIVVNGLQRVRPGDEVAPQ 373
           AG+ IVVNGLQR+RPG  +APQ
Sbjct: 366 AGDTIVVNGLQRIRPGATIAPQ 387