Pairwise Alignments

Query, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

Subject, 450 a.a., 23S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score =  299 bits (765), Expect = 1e-85
 Identities = 181/436 (41%), Positives = 247/436 (56%), Gaps = 15/436 (3%)

Query: 1   MPVGK-----IESLDHDARGVTRLEGKTVFVEGALPGETVEYALFREKPNYAVGEVSAVL 55
           +PVGK     IE L +D RG+   EG+T FV GAL GE VE  +              V 
Sbjct: 21  IPVGKKQRLTIERLANDGRGIVFFEGRTWFVNGALAGEEVEARVLGTHGKIVEARTERVF 80

Query: 56  RPSCARVPPRCPHFGTCGGCSMQHLEPTAQVAAKQRLLENNLWHLARLKPEQVYNPIYGP 115
             S  R P  C HFG CGGCS+QHL    Q+A KQR+L   L  +A ++P++   P+ G 
Sbjct: 81  SASELRRPAPCAHFGRCGGCSVQHLPHGEQLALKQRMLAEQLSRVAGVEPQEWAAPLSGA 140

Query: 116 TWGYRHRARLTVRM-VESKGMLVGFHEKRSSYVADLHTCPILPAHVSDLLVPLRQLFVRL 174
            +GYR RAR+ VR    +K + VGF    S  +  +  CP+L   +  ++  L  +  RL
Sbjct: 141 EFGYRRRARVAVRWDARAKQLEVGFRAVASQDIVAIDECPVLVQALQPIMQRLPNMLRRL 200

Query: 175 SIRDRLPQVEIAVGEKCTVMVLRILEPLSGADEKLLRAFADEHGIVFFLQPKGPASAYRF 234
           S    L  VE+  G    V+ LR + PLS AD ++L+ F   H    +L  +G       
Sbjct: 201 SKPQALGHVELFSGTSVAVL-LRHIAPLSEADLQVLKEFCAFHEAQLWLHGEGQP----- 254

Query: 235 HPVDGPD-LSYLLPEFGLEMRFSPTEFTQVNPGINQMLIRRAMRLLDPQPGERIADLFCG 293
            PV+    L + L  + LE+ + P +F QVN G+N+ ++ +A+  L PQP ER+ DLFCG
Sbjct: 255 EPVEADSVLGFRLSHWDLELAYRPGDFVQVNAGVNEAMVAQALEWLAPQPDERVLDLFCG 314

Query: 294 LGNFTLPIARSGARVVGVEGLKELTRRAEENAAANGLAANVSFGVANLFECTPKSLGALG 353
           LGNF LP+AR    VV VEG++ +  RA  NA +N L  NV F  A+L +    +  A  
Sbjct: 315 LGNFALPLARQVREVVAVEGVQTMVERAAVNAVSNDL-HNVQFFQADLSQPLTDAEWAKQ 373

Query: 354 HFDKMLIDPPREGAVEVVKALGEDSPGRIVYVSCNPSTLARDAAILVHQKGYRFSGAGIV 413
            F  +L+DPPR+GA+EVV+ L      R+VYVSCNP+TLARD   LV Q GYR   AGI+
Sbjct: 374 GFSAVLLDPPRDGALEVVRKLATLGAKRLVYVSCNPATLARDTVELVKQ-GYRLKRAGIL 432

Query: 414 NMFPHTSHVESIALFE 429
           +MFP T+HVE++ALFE
Sbjct: 433 DMFPQTAHVEAMALFE 448