Pairwise Alignments

Query, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

Subject, 361 a.a., tRNA/tmRNA (uracil-C(5))-methyltransferase from Pseudomonas putida KT2440

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 83/294 (28%), Positives = 123/294 (41%), Gaps = 40/294 (13%)

Query: 154 PILPAHVSDLLVPLRQLF-VRLSIRDRLPQVEIAVGEKCTVMVLRILE-PLSGADEKLLR 211
           PI    ++ L+  L+  +     + +RL QVE         M+      PL  A E   R
Sbjct: 78  PIASERINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMITMCYHRPLDEAWEVEAR 137

Query: 212 AFADEHGIVFFLQPKGPASA----YRFHPVD--GPDLSYLLPEFGLEMRFSPTEFTQVNP 265
             A+  G+    + KG        Y    +D  G   SY  PE           FTQ N 
Sbjct: 138 QLAEALGVSVIGRSKGKRLVIGRDYAVEKLDVAGRVFSYRQPEGA---------FTQPNG 188

Query: 266 GINQMLIRRAMRLLDPQPGERIADLFCGLGNFTLPIARSGARVVGVEGLKELTRRA---- 321
            +NQ ++  A   +  +  + + +L+CG GNFTLP+A    +V+  E  K     A    
Sbjct: 189 AVNQKMLSWAFEAIGEREDD-LLELYCGNGNFTLPLATRVRQVLATEISKTSVNAALSNL 247

Query: 322 EENAAANGLAANVSFG--VANLFECTP-KSLGALG----HFDKMLIDPPREG----AVEV 370
           +ENA  N     +S       L E  P + L  +      F  + +DPPR G      E+
Sbjct: 248 DENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYQFGTVFVDPPRAGMDPDTCEL 307

Query: 371 VKALGEDSPGRIVYVSCNPSTLARDAAILVHQKGYRFSGAGIVNMFPHTSHVES 424
            +        RI+Y+SCNP TLA + A L  Q  +R     + + FP+T H+ES
Sbjct: 308 TRRF-----ERILYISCNPETLAANIAQL--QDTHRIERCALFDQFPYTHHMES 354