Pairwise Alignments

Query, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

Subject, 414 a.a., class I SAM-dependent RNA methyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  117 bits (292), Expect = 9e-31
 Identities = 119/457 (26%), Positives = 188/457 (41%), Gaps = 70/457 (15%)

Query: 1   MPVGKIESLDHDARGVTRLEGKTVFVEGALPGETVEYALFREKPNYAVGEVSAVLRPSCA 60
           M +  I+ +     GV +     VF    LPGETV   +   +      E   ++ PS  
Sbjct: 1   MDIFTIDRVGGQGDGVAQTPSGPVFAGLTLPGETVRGVVVDGRL-----EEVEIITPSPD 55

Query: 61  RVPPRCPHFGTCGGCSMQHLEPTAQVAAKQRLLENNLWHLARLKPEQVYNPIYGPTWGYR 120
           R+ P  P +G CGGCS+QH      +  K+   E     LAR + E             R
Sbjct: 56  RIAPVSPQYGDCGGCSLQHWSEQPYLDWKR---EQVRLALARERIETEIESTVATPPASR 112

Query: 121 HRARLTVRMVESKGMLVGFHEKRSSYVADLHTCPILPAHVSDLLVPLRQLFVR------- 173
            R  L  R  +   +++GF  +RS  + ++  CP+    +   +  L Q+          
Sbjct: 113 RRLALHARRTQDGRVVLGFKARRSWRLVEVKACPVADPRIVAAIPALTQVAAAFFEHPKS 172

Query: 174 ---LSIRDRLPQVEIAV--------GEKCTVMVLRILEPLSGADEKLLRAFADEHGIVFF 222
              L +   L  +++ V        G       ++ ++    AD   L    D   +V  
Sbjct: 173 APTLHVTWTLSGLDVDVTGVERRSGGGLSADAQMQAIQAAHRADLARLSLAGDT--LVMA 230

Query: 223 LQPK---GPASAYRFHPVDGPDLSYLLPEFGLEMRFSPTEFTQVNPGINQMLIRRAMRLL 279
            QPK   GPA+               LP  G         F Q  P     ++ RA+  +
Sbjct: 231 RQPKVAFGPATVS-------------LPAGG---------FLQAVPQAEAAMVARALAAV 268

Query: 280 DPQPGERIADLFCGLGNFTLPIAR------SGARVVGVEGLKELTRRAEENAAANGLAAN 333
             +  ++IADLFCG G FT P+A       + A   G++ LK          +A G+ A 
Sbjct: 269 --KGAKKIADLFCGAGTFTFPLATVAPVIAADASKPGIDALKAAI------GSAKGMKA- 319

Query: 334 VSFGVANLFECTPKSLGALGHFDKMLIDPPREGAVEVVKALGEDSPGRIVYVSCNPSTLA 393
           ++    +LF   P +   L   D ++ DPPR GA++    + +   G +V VSCNP T A
Sbjct: 320 ITAEARDLFR-RPMNPYDLKGCDAIVFDPPRAGAIDQTAQIADTKAGVVVGVSCNPQTFA 378

Query: 394 RDAAILVHQKGYRFSGAGIVNMFPHTSHVESIALFEK 430
           RDA +L+   G+R      V+ F  +SHVE + +F++
Sbjct: 379 RDARVLI-DAGFRLETVTPVDQFLWSSHVELVGVFKR 414