Pairwise Alignments

Query, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

Subject, 433 a.a., 23S rRNA m(5)U1939 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score =  295 bits (756), Expect = 1e-84
 Identities = 174/426 (40%), Positives = 234/426 (54%), Gaps = 16/426 (3%)

Query: 6   IESLDHDARGVTRLEGKTVFVEGALPGETVEYALFREKPNYAVGEVSAVLRPSCARVPPR 65
           +  LD   +GV R  GKT+F+ G LP E  E  +  +K  YA  +V   L  S  R  PR
Sbjct: 21  VNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPR 80

Query: 66  CPHFGTCGGCSMQHLEPTAQVAAKQRLLENNLWHLARLKPEQVYNPIYGPTWGYRHRARL 125
           CPHFG CGGC  QH     Q  +K   L       ARL    V   I    WGYR RARL
Sbjct: 81  CPHFGVCGGCQQQHASVDLQQRSKSAAL-------ARLMKHDVSEVIADVPWGYRRRARL 133

Query: 126 TVRMV-ESKGMLVGFHEKRSSYVADLHTCPILPAHVSDLLVPLRQLFVRLSIRDRLPQVE 184
           ++  + +++ + +GF +  SS + D+  CPIL   +  LL  +R     L     L  VE
Sbjct: 134 SLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVE 193

Query: 185 IAVGEKCTVMVLRILEPLSGADEKLLRAFADEHGIVFFLQPKGPASAYRFHPVDGPDLSY 244
           +      T+M+LR   PLS AD + L  F+   G+  +L P           V G    Y
Sbjct: 194 LVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEI----LETVSGEMPWY 249

Query: 245 LLPEFGLEMRFSPTEFTQVNPGINQMLIRRAMRLLDPQPGERIADLFCGLGNFTLPIARS 304
                GL + FSP +F QVN G+NQ ++ RA+ LLD QP +R+ DLFCG+GNFTLP+A  
Sbjct: 250 --DSNGLRLTFSPRDFIQVNAGVNQKMVARALELLDVQPEDRVLDLFCGMGNFTLPLATQ 307

Query: 305 GARVVGVEGLKELTRRAEENAAANGLAANVSFGVANLFECTPKSLGALGHFDKMLIDPPR 364
            A VVGVEG+  L  + ++NA  NGL  NV+F   NL E   K   A   FDK+L+DP R
Sbjct: 308 AASVVGVEGVPALVEKGQQNARLNGL-QNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR 366

Query: 365 EGAVEVVKALGEDSPGRIVYVSCNPSTLARDAAILVHQKGYRFSGAGIVNMFPHTSHVES 424
            GA  V++ + +  P RIVYVSCNP+TLARD+  L+ + GY  +   +++MFPHT H+ES
Sbjct: 367 AGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALL-KAGYTIARLAMLDMFPHTGHLES 425

Query: 425 IALFEK 430
           + LF +
Sbjct: 426 MVLFSR 431