Pairwise Alignments

Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  297 bits (760), Expect = 3e-84
 Identities = 238/650 (36%), Positives = 323/650 (49%), Gaps = 45/650 (6%)

Query: 400  LRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMSAN 459
            L  KEA E A+R KS+FLANMSHEIRTP+NG++G T L   +ELT  Q DYL  ++ SA+
Sbjct: 273  LARKEALE-ASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSELTPRQLDYLGTIEKSAD 331

Query: 460  ALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPGVP 519
             LL II++ILDFSKIEAG+L ++ IPF+L  +  D L  +A  A  K LEL++      P
Sbjct: 332  NLLGIINEILDFSKIEAGKLVLDSIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTP 391

Query: 520  RRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIAPE 579
              L+GDP RL+QIL NL+ NAIKFT  G I     + +       L   V DTGIG++ +
Sbjct: 392  LALVGDPLRLKQILTNLISNAIKFTREGTIVARAMIEDEQEDSVQLRISVQDTGIGLSSQ 451

Query: 580  KQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPGQGSAFHFTLQLP 639
                +F+AF+Q D+S +R+ GGTGLGL I  RL E MGG I VDS PG+GS F  +L LP
Sbjct: 452  DVRALFQAFSQADNSLSRQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSEFWISLNLP 511

Query: 640  -TDGAAAPEPERRLSG-KPALLLVVANARQRCRLQGLLASWGATVV---AAASGAEGLAL 694
             T       P   L G + A+L     ARQ   LQ  L   G  V    +  S   G+  
Sbjct: 512  KTRDDVEDLPSAPLLGHRVAVLENHELARQ--ALQHQLEDCGLEVTPFNSLESLTNGITS 569

Query: 695  LEQGQWD------GVVADSRPVDGDAGDL--LEHLARSPGRVPLLMLLSPSRMRQEIARC 746
              Q +        GV A+  P +     L  LEHL         +++L P+  +    + 
Sbjct: 570  AHQTEQAIDLAVLGVTANDIPPERLNQHLWDLEHLGCK------VLVLCPTTEQMLFNQS 623

Query: 747  KALGVGHYLGKPALADELWRSLQALLEPAVAGVPATVAEAAGTPPAGLEVLLAEDHPVNQ 806
                      KPA   +L R+L  L+ P     P+              VL  +D+P N 
Sbjct: 624  VPNPNSQLQAKPACTRKLRRALSDLISPR----PSRSEPGEPLSSRAPRVLCVDDNPANL 679

Query: 807  QLMRNMLERMGHRVTLARHGGEAVAAAARRRFDLVLMDMQMPEMGGEQATRLIRADEQAR 866
             L++ +LE MG RV     G  A+ A  +  FDLVLMD+QMP M G Q+T  IR  E  R
Sbjct: 680  LLVQTLLEDMGARVRAVESGYAAIDAVKQDTFDLVLMDVQMPGMDGRQSTEAIRQWESER 739

Query: 867  GLAPLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQKDLQEVL---AGLA----RPGQE 919
               PL + AL+A A   +++  L +GMD YL KP+ ++ L +V+    GLA     P + 
Sbjct: 740  SGTPLPVVALTAHAMANEKRALLQSGMDDYLTKPISERQLAQVVLKWTGLALRNQGPERV 799

Query: 920  EGGFDYGRMLEGADRDV-LQII---GDVFPGLARLEMAAMEE-------ALAAADWERLG 968
              G   G  L   D +  L++     D+   +  + +A++E        A  A D   L 
Sbjct: 800  ADGLGPGVQLPVLDHEEGLRLAAGKADLAADMLAMLLASLEADRLAITIARDANDNNALI 859

Query: 969  RVAHSLRGAAANFGPSPLVQQATEVERLAPHQAVQPAH-LAELRLALEAL 1017
               H L GA    G   L       E L      +  H L EL +A+  L
Sbjct: 860  ERVHRLHGATRYCGVPQLRAACHRAETLLKQDDAKAQHALDELDMAIARL 909