Pairwise Alignments

Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 931 a.a., signal transduction histidine kinase from Dechlorosoma suillum PS

 Score =  308 bits (788), Expect = 2e-87
 Identities = 249/690 (36%), Positives = 335/690 (48%), Gaps = 84/690 (12%)

Query: 398  EILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMS 457
            E+  +++AAE A+R KS FLA MSHEIRTP+NGV+GM  L   T L+ +QR   EA   S
Sbjct: 254  ELTHSRDAAEEASRVKSRFLATMSHEIRTPLNGVLGMIRLLQTTALSGDQRRMTEAALRS 313

Query: 458  ANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPG 517
               LL++++D+LDFSKIEAG+L V+ +PFDL      A   +A  A +KGLEL       
Sbjct: 314  GETLLNVLNDVLDFSKIEAGKLTVDAVPFDLADTVESAALLLAPNAREKGLELAVHLKGE 373

Query: 518  VPRRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQ--------VLYFCV 569
            +P  L GDP RL+Q+L NLLGNA+KFTE+GE+ + VE   PGAAG         +L F V
Sbjct: 374  LPVTLAGDPNRLKQVLFNLLGNAVKFTEQGEVCLRVE-RSPGAAGDSRERGDVILLRFTV 432

Query: 570  SDTGIGIAPEKQEHIFEAFAQE----------DSSTTRRFGGTGLGLTICSRLCELMGGR 619
             DTG GI   +Q  +F+A++Q           + + +RR  GTGLGL I   L  LMG R
Sbjct: 433  RDTGPGIPESEQGKLFQAYSQTSAASQTPAEIEEAASRRAEGTGLGLAISRELVRLMGAR 492

Query: 620  -IWVDSVPGQGSAFHFTLQ---LPTDGAAAPEPERR---LSGKPALLLVVANARQRCRLQ 672
             + V S PG+G  F F L    +  +      P  R   L  +P L L+         LQ
Sbjct: 493  DLTVSSRPGEGCEFSFELPFHVVRDNPTGIHYPGFRLVLLEPQPTLALI---------LQ 543

Query: 673  GLLASWGATVVAAASGAEGLALLEQGQWDGVVADSRPVDGDAGDLLEHLARSPGRVPLLM 732
                S G     A +  E   LL +G    V+AD   +        +   R  G    L 
Sbjct: 544  DYAQSLGLDCRLARNAPEAERLLGEGAAQAVLADLCYLQLPEATWQDWHRRCGGVWIALS 603

Query: 733  LLSPSRMRQEIARCKALGVGHYLGKPALADELWRSLQALLEPAVAGV---PATVAEAAGT 789
                S +  E+A+  A      L KP    E  RS+      A  G    PA   + A  
Sbjct: 604  DFGASTLEGELAQVFA----QRLSKPVSRKEFVRSIGQAFMVAPRGAELPPAAGWQGAAW 659

Query: 790  PPAGL----------EVLLAEDHPVNQQLMRNMLERMGHRVTLARHGGEAVAAAARRRFD 839
             PA            +VLL ED+  NQ++ R +L+  G +V +A HG EA+   A R FD
Sbjct: 660  RPAAAAVPNRPRFHGKVLLVEDNLTNQEVTRGLLQVFGCQVEVANHGREALEKWAERDFD 719

Query: 840  LVLMDMQMPEMGGEQATRLIRADEQARGLAPLRIYALSAAARREDRQRGLVAGMDGYLLK 899
            L+LMD QMP M G  A+R +R  E   G  P  I AL+A +  EDRQR L AGM+G+L K
Sbjct: 720  LILMDCQMPVMDGLTASRELRQREIQAGRLPTAIIALTANSFAEDRQRCLAAGMNGFLPK 779

Query: 900  PLQQKDLQEVLAG-------------LARPGQEEGGFDYGRMLE--GADRDVLQIIGDVF 944
            P  +  L  +L                ARP +E G      +L+   A ++    +  +F
Sbjct: 780  PFDELALVALLTDWLGPPEGGAQVRVQARPEREAGALLDAAVLDAIAARQEEAGEVRSIF 839

Query: 945  PGLARLEMAAMEEA------LAAADWERLGRVAHSLRGAAANFGPSPLVQQATEVERLAP 998
              LAR     + +A      +A  D       AHSL+ AAA+ G  PL + A  VE  A 
Sbjct: 840  --LARFVSTFLAQASQALQNMAQDDLAAAREAAHSLKSAAASIGARPLSELAARVEAAAR 897

Query: 999  H-QAVQ--------PAHLAELRLALEALLQ 1019
              QA +        P  LA+ R ALE  ++
Sbjct: 898  EGQAAEVRRLGESLPQLLADTRSALERYME 927



 Score = 26.6 bits (57), Expect = 0.009
 Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 21/84 (25%)

Query: 641 DGAAAPEPERRLSGKPALLLVV--------------ANARQRCRLQGLLASWG----ATV 682
           DG AA +  R LS  PA++ V+               N  Q+ RL  L ASW     +  
Sbjct: 69  DGKAAQDTLRALSADPAVIEVLVSDAQGQLFARYLRGNPLQQERLAWLPASWNRIRESRE 128

Query: 683 VAAASGAEG---LALLEQGQWDGV 703
           +   SG  G   L     G WD V
Sbjct: 129 IVFHSGVVGHIELLASRDGYWDAV 152