Pairwise Alignments

Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 858 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  328 bits (842), Expect = 8e-94
 Identities = 239/656 (36%), Positives = 328/656 (50%), Gaps = 29/656 (4%)

Query: 272 RLDEQLHFSRQV-LDTLPVPLYFKDTQGRYQGF----NKAFADFFGIEPSLWIGRHVRDL 326
           R  E++   +Q  LD   + + + DT           N+  A  FG      IG    +L
Sbjct: 208 RAKEEVEAIQQTTLDASAIGIAYLDTSNHEDRHVVLANRQMAAMFGYGSQEVIGLRAEEL 267

Query: 327 LPPELAEQHVARD-EEVFARGGRQSYEIELITPAGARYDTLYNKAALTRPDGSVRGLVGT 385
            P   +     +D   +  +G     E+ +    G  +    +  A+  PD   RG+V T
Sbjct: 268 YPSRESFVSATQDIMPILEQGQVMRQELIMRRRNGECFWCAVSGKAIN-PDDLSRGVVWT 326

Query: 386 IMDISERKRWEAEILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTE 445
             D++ERK  E+E+  A+E AE ANRAKS+FLANMSHEIRTP  G++G+ +L L T L E
Sbjct: 327 FEDVTERKAAESELRHAREKAEAANRAKSEFLANMSHEIRTPFTGILGVLDLLLHTPLNE 386

Query: 446 EQRDYLEAVQMSANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQ 505
           +Q  Y+     S   LL+I++DILD SKIEAG+L +     DL  +  +     A  A Q
Sbjct: 387 KQERYIRLAYGSTKQLLAILNDILDISKIEAGKLVIHPEEVDLVLLLGELTEVQAAAAAQ 446

Query: 506 KGLELLARRGPGVPRRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVL 565
           KGLE        +P ++ GDP RLRQI+ NLL NAIKFT  G +E+ +E        Q L
Sbjct: 447 KGLEFRYHIKGIIPPKIHGDPVRLRQIMANLLNNAIKFTNSGWVELDIECTRIAPGRQHL 506

Query: 566 YFCVSDTGIGIAPEKQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSV 625
              V D+GIG+ PE QE IF+ F Q DSSTTR FGGTGLGLTIC +L ELM G I V S 
Sbjct: 507 RVEVRDSGIGVPPELQETIFDKFTQADSSTTRLFGGTGLGLTICKQLVELMHGSIGVSSN 566

Query: 626 PGQGSAFHFTLQLP-TDGAAAP-------EPERRLSGKPALLLVVANARQRCRLQGLLAS 677
            G+GS F F ++LP +D   +P        P   L     +LLV      R  L   LA 
Sbjct: 567 SGEGSCFWFDIELPESDPTVSPVPVLPAGSPITALPRDTRILLVDDTEANREVLAEYLAQ 626

Query: 678 WGATVVAAASGAEGLALLEQGQWDGVVADSRPVDGDAGDLLEHLARSPG---RVPLLMLL 734
               V  AA+G E + L E  Q D ++ D +    D  +    +    G   R P++  L
Sbjct: 627 AHCQVRQAANGLEAVTLAESWQPDAILMDCQMAGMDGYEATRQIRIQEGQRRRTPII-AL 685

Query: 735 SPSRMRQEIARCKALGVGHYLGKPALADELWRSLQALLEPAVAGVPATVAEAAGTPPAGL 794
           +   MR +  +C A G+  YL KP  A  L  ++   LE             A TP    
Sbjct: 686 TAFVMRGDREKCLAAGMDDYLPKPVDAQTLIATIGKWLE-------GRETNPARTPRFSG 738

Query: 795 EVLLAEDHPVNQQLMRNMLERMGHRVTLARHGGEAVAAAARRRFDLVLMDMQMPEMGGEQ 854
            +LL +D+P  ++    +LE +G +V  A  G EA+       FDLVLMD +MP + G  
Sbjct: 739 RILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADFDLVLMDCRMPGLDGCA 798

Query: 855 ATRLIRADEQARGLAPLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQKDLQEVL 910
            TR  RA E+     P  I AL+A    E R +   AGM+ +L KP  +++L  +L
Sbjct: 799 TTRAWRARERG---TPTAIIALTAGDPDESRAQCREAGMNDFLAKPFSEQELVTLL 851



 Score = 42.4 bits (98), Expect = 1e-07
 Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 5/131 (3%)

Query: 646 PEPERRLSGKPALLLVVANARQRCRLQGLLASWGATVVAAASGAEGLALLEQGQWDGVVA 705
           P    R SG+  +LLV  N   R     LL + G  V +A+SG E L L  +  +D V+ 
Sbjct: 730 PARTPRFSGR--ILLVDDNPEIREASTCLLEALGCQVQSASSGEEALQLGPEADFDLVLM 787

Query: 706 DSRP--VDGDAGDLLEHLARSPGRVPLLMLLSPSRMRQEIARCKALGVGHYLGKPALADE 763
           D R   +DG A       AR  G    ++ L+     +  A+C+  G+  +L KP    E
Sbjct: 788 DCRMPGLDGCATTRAWR-ARERGTPTAIIALTAGDPDESRAQCREAGMNDFLAKPFSEQE 846

Query: 764 LWRSLQALLEP 774
           L   L+  L P
Sbjct: 847 LVTLLRRWLAP 857



 Score = 35.8 bits (81), Expect = 1e-05
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 19/152 (12%)

Query: 133 TLVRERESSRIRLHQAHSSLEQQKFALDQHAI-VSVTDVEGF----IIEANDRFCEISGY 187
           T     ES+ +R  +   +++Q    LD  AI ++  D        ++ AN +   + GY
Sbjct: 197 TRASRAESALLRAKEEVEAIQQT--TLDASAIGIAYLDTSNHEDRHVVLANRQMAAMFGY 254

Query: 188 SREELVG-RNHRVVKSGIHPPAFYQEMWDTIVHGRVWQGEVCNRSKDGRLYWVSAT---V 243
             +E++G R   +  S     +  Q++   +  G+V + E+  R ++G  +W + +   +
Sbjct: 255 GSQEVIGLRAEELYPSRESFVSATQDIMPILEQGQVMRQELIMRRRNGECFWCAVSGKAI 314

Query: 244 VPFFDDL--GVPYQYIAIRTDITARKLAEARL 273
            P  DDL  GV + +     D+T RK AE+ L
Sbjct: 315 NP--DDLSRGVVWTF----EDVTERKAAESEL 340