Pairwise Alignments
Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS
Subject, 1430 a.a., PAS domain S-box from Dechlorosoma suillum PS
Score = 319 bits (817), Expect = 1e-90
Identities = 304/974 (31%), Positives = 445/974 (45%), Gaps = 133/974 (13%)
Query: 145 LHQAHSSLEQQKFALDQHAIVS-----VTDVEGFIIEANDRFCEISGYSREELVGRNHRV 199
LHQ+ +L Q + AL + V+ D+ ++ ++ + G + VG + +
Sbjct: 400 LHQSQETLRQSEAALKRTQTVARIGSWKIDIPANLLHWSEEAHHLLGVPWDHGVGFDEFL 459
Query: 200 VKSGIHPPAFYQEMWDTIVHGRVWQGEVCNRSKDGRLYWVSATVVPFFDDLGVPYQYIAI 259
+ A+ + W + G + E DG + WV FD+ G P + I +
Sbjct: 460 AQVHGDDRAWVRSAWLAALEGAEFDIEH-RMVVDGTVKWVRQRAELEFDEAGKPLRGIGM 518
Query: 260 RTDITARKLAEARLDEQLHFSRQVLDTLPVPLYFKDTQGR-YQGFNKAFADFFGIEPSLW 318
DITA K A L ++ R + + + + D + + FN A + G
Sbjct: 519 VQDITAIKDASETLKQREKIFRSITNQAAIGIVLIDAETMTFAEFNDAACECLG------ 572
Query: 319 IGRHVRDLLPPELAEQHVARDEEVFARGGRQSYEIELITPAGARYDTLYNKAALTRPDGS 378
+ R+ E A+ V + V R G + +++ A ++ DGS
Sbjct: 573 ---YTRE----EFAKLSVYDIQGVHDRAGVDARRAQILAQREAAFENQRR-----HKDGS 620
Query: 379 VRGLVGTIM---------------DISERKRWEAEILR------------------AKEA 405
+R T+ DI+E K E +LR AKEA
Sbjct: 621 LRDFWVTVKVLRLNGRDYLSSVWTDITEAKENERALLRYQNQLEELVAARTAELAAAKEA 680
Query: 406 AENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQRDYLEAVQMSANALLSII 465
AE ANR+KS FLANMSHEIRTPMN +IG+T L TE QR L+ V +A+ LL II
Sbjct: 681 AEAANRSKSSFLANMSHEIRTPMNAIIGLTHLIRRDIATERQRQQLDKVSNAAHHLLGII 740
Query: 466 DDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGLELLARRGPGVPRRLLGD 525
+DILDFSKIEAG++ +E F++++V + VA +A+ KGLE++ +P L GD
Sbjct: 741 NDILDFSKIEAGKMSLEPTDFEVDRVIHNVCTLVAEKAEAKGLEVVVDIA-RLPPALHGD 799
Query: 526 PGRLRQILLNLLGNAIKFTERGEIEVAVELAEPGAAGQVLYFCVSDTGIGIAPEKQEHIF 585
RL Q+LLN +GNA+KFTERG + V +A A + V+DTGIG++ E+Q+ +F
Sbjct: 800 GLRLGQVLLNFVGNAVKFTERGSVVVRGYVARQEADSLWVRLEVADTGIGLSREQQQCLF 859
Query: 586 EAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPGQGSAFHFTLQLPTDGAAA 645
+AF Q D STTR++GGTGLGL I RL E+MGGR+ VDS G+GS F ++ P AA
Sbjct: 860 QAFTQADVSTTRQYGGTGLGLAISRRLAEMMGGRVGVDSESGKGST--FWIEAPFGSVAA 917
Query: 646 PEPERRLSGKPAL------LLVVANARQRCRLQGLLASWGATVVAAASGAEGLALLEQGQ 699
+ L P L L V + R L LA+ G V AASG L
Sbjct: 918 HD---HLELPPCLPRNLRALAVDDSEDARESLAHTLAALGTRVDTAASGEAAL------- 967
Query: 700 WDGVVADSRPVDGDAGDLLEHLARSP-----GRV---------PLLMLLSPSRMRQEIAR 745
D V+A R D LL+ L P GR P +L+S ++ A
Sbjct: 968 -DAVLAADRLGDPYQLVLLDWLMPPPDGLETGRCIRTLPLNVQPQQLLVSAAKDIPATAL 1026
Query: 746 CKALGVGHYLGKPALADELWRSLQALL--EPAVAGVPATVAEAAGTPPAGLEVLLAEDHP 803
+A G ++ KP + +L+ P ++ P E + +LLAED+P
Sbjct: 1027 SEA-GFAAFIAKPVTPASVLVALEGAFGDTPPLSRSPGDEMERSLARYRNQRILLAEDNP 1085
Query: 804 VNQQLMRNMLERMGHRVTLARHGGEAVAAAARRRFDLVLMDMQMPEMGGEQATRLIRADE 863
+NQ++ +L +G V LA +G EA+ A + + L+LMD+QMP M G +A+R IRA
Sbjct: 1086 LNQEVALELLRHVGLAVDLAENGKEALELARGKAYALILMDIQMPVMDGLEASRQIRA-- 1143
Query: 864 QARGLAPLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQKDLQ-EVLAGLARPGQEEGG 922
G A I A++A A EDR + AGM+ ++ KP+ L +L L PG++
Sbjct: 1144 -LPGYAGTPILAMTANAFSEDRDLCIAAGMNDHVAKPVDPDQLYGTLLRWLPEPGRDVVV 1202
Query: 923 FDYGRMLE--GADRDVLQIIGDVFPGLA-----------RLEMA---------------A 954
E A D L + PGL R +A
Sbjct: 1203 RPPLPAAEAPAATADALAAALEAVPGLELAQALRVVRGNRTRLAQFLRKFSVDHGGDGRR 1262
Query: 955 MEEALAAADWERLGRVAHSLRGAAANFGPSPLVQQATEVE---RLAPHQAVQPAHLAELR 1011
+E L + RV H+L+G A + G + + +E R + QA A LA L
Sbjct: 1263 IEACLGFGETAEAARVVHTLKGLAGSLGLAAIQAHTLALEEALRGSLPQAEVDARLARLE 1322
Query: 1012 LAL---EALLQGLQ 1022
AL A L GL+
Sbjct: 1323 GALAEFNAALAGLE 1336
Score = 51.2 bits (121), Expect = 5e-10
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 9/174 (5%)
Query: 257 IAIRTDITARKLAEARLDEQLHFSRQVLDTLPVPLYFKDTQGRYQGFNKAFADFFGIEPS 316
+A R + AR +A L+ + + ++ +P ++ KD G Y N F FG +
Sbjct: 264 LAFREAVVARGHMQAALEAERQHLKSLIQGMPDLVWLKDPAGIYLACNSRFESLFGHREA 323
Query: 317 LWIGRHVRDLLPPELAEQHVARDEEVFARGGRQSYEIELITPAGARYDTLYN-KAALTRP 375
+GR D + ELA+ D A G E L+ A + + K +
Sbjct: 324 EIVGRTDYDFVGRELADFFRDNDRRAMALGHASRNEEWLVFAADGHRELVETIKTPIYDR 383
Query: 376 DGSVRGLVGTIMDISERKRWEAEILRAKEAAENANRA-------KSDFLANMSH 422
DG V G++G DI+ + E LR EAA + K D AN+ H
Sbjct: 384 DGVVLGVLGVARDITPLHQ-SQETLRQSEAALKRTQTVARIGSWKIDIPANLLH 436
Score = 34.7 bits (78), Expect = 5e-05
Identities = 82/350 (23%), Positives = 130/350 (37%), Gaps = 60/350 (17%)
Query: 639 PTDGAAAPEPERRLSG--KPALLLVVANARQRCRLQGLLASWGATVVAAASGAEGLALLE 696
P + E ER L+ +LL N + LL G V A +G E L L
Sbjct: 1057 PLSRSPGDEMERSLARYRNQRILLAEDNPLNQEVALELLRHVGLAVDLAENGKEALELAR 1116
Query: 697 QGQWDGVVADSRPVDGDAGDLLEHLARSPGRVPL-LMLLSPSRMRQEIARCKALGVGHYL 755
+ ++ D + D + + PG ++ ++ + ++ C A G+ ++
Sbjct: 1117 GKAYALILMDIQMPVMDGLEASRQIRALPGYAGTPILAMTANAFSEDRDLCIAAGMNDHV 1176
Query: 756 GKPALADELWRSLQALL-EPAVAGVPATVAEAAGTPPAGLEVLLAEDHPV-NQQLMRNML 813
KP D+L+ +L L EP V AA P A + L A V +L + +
Sbjct: 1177 AKPVDPDQLYGTLLRWLPEPGRDVVVRPPLPAAEAPAATADALAAALEAVPGLELAQALR 1236
Query: 814 ERMGHRVTLAR--------HGGEAVAAAARRRFDLVLMDMQMPEMGGEQATRLIRADEQA 865
G+R LA+ HGG+ RR + L + E + ++ +
Sbjct: 1237 VVRGNRTRLAQFLRKFSVDHGGDG------RRIEACLGFGETAEAA--RVVHTLKGLAGS 1288
Query: 866 RGLAPLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQKDLQEVLAGLARPGQEEGGFDY 925
GLA ++ + L+ E+ RG + EV A LAR
Sbjct: 1289 LGLAAIQAHTLAL----EEALRGSLPQA--------------EVDARLAR---------- 1320
Query: 926 GRMLEGADRDVLQIIGDVFPGLARLEMAAMEEALAAADWERLGRVAHSLR 975
LEGA + + LA LE A+E A DW +LGR L+
Sbjct: 1321 ---LEGA-------LAEFNAALAGLE-GAVEAAAPGIDWAQLGREVEVLQ 1359