Pairwise Alignments

Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 1306 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  430 bits (1106), Expect = e-124
 Identities = 303/794 (38%), Positives = 423/794 (53%), Gaps = 46/794 (5%)

Query: 260  RTDITARKLAEARLDE--QLHFSRQVLDTLPVPLYFKDTQGRYQGFNKAFADFFGIEPSL 317
            R +   R+LA+AR +   QL   + ++D++P P++FKD +GR+ G N+A+ D FG+    
Sbjct: 422  RVEQRTRELADAREESSRQLVLLQAIMDSMPNPVFFKDAEGRFLGCNRAYEDTFGVGRGQ 481

Query: 318  WIGRHVRDL--LPPELAEQHVARDEEVFARGGRQSYEIELITPAGARYDTLYNKAALTRP 375
             +G+ VR+L  L  E  ++  A  E +   G     E++L    G R+DTLY     +R 
Sbjct: 482  IVGKTVRELPFLSEEEKQELQAVSEAIIRDGIMMHRELQLPFADGLRHDTLYWANGFSRE 541

Query: 376  DGSVRGLVGTIMDISERKRWEAEILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMT 435
            DG+  G+VG ++DISERK  E E+ RA+  AE A  AKS FLANMSHEIRTPMN +IGM 
Sbjct: 542  DGTPGGMVGVVVDISERKLMEEELRRARATAEEATEAKSLFLANMSHEIRTPMNAIIGMA 601

Query: 436  ELALDTELTEEQRDYLEAVQMSANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADA 495
             LA+ TELT +QRDY+  +  +A +LL II+DILDFSKIEAG+L +E +PF LE V  + 
Sbjct: 602  HLAMKTELTPKQRDYVGKIHNAAISLLGIINDILDFSKIEAGKLSLEYVPFSLEDVLDNV 661

Query: 496  LRTVAVRADQKGLELLARRGPGVPRRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVEL 555
               + ++A++KGLELL     G P  L+GDP RL QIL NL+ NAIKFTERG+I +    
Sbjct: 662  SGLLGLKANEKGLELLFNVNAGTPAGLVGDPLRLNQILTNLVSNAIKFTERGQITLTTRP 721

Query: 556  AEPGAAGQVLYFCVSDTGIGIAPEKQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCEL 615
             +       L F + D GIG++ E+  H+F+AF Q D STTR++GGTGLGL+I  RL E+
Sbjct: 722  VDQAGDRVKLQFWIEDMGIGMSREQLLHLFQAFTQADGSTTRKYGGTGLGLSISRRLVEM 781

Query: 616  MGGRIWVDSVPGQGSAFHFTLQLPTDGAAAPEPERRLSGKPALLLVVA--NARQRCRLQG 673
            MGG IW DS  G+GS F FT         A  P    +    L ++VA  N   R  L  
Sbjct: 782  MGGTIWADSTLGEGSTFCFTAWFGRAEELA-RPRTLPASLAGLRVLVADDNGAAREILGE 840

Query: 674  LLASWGATVVAAASGAEGLALLEQGQ-----WDGVVADSRPVDGDAGDLLEHL--ARSPG 726
             L          ASGAE LA L + Q     +  +  D +  D D    L  L  A    
Sbjct: 841  ALRHLDLRPDLVASGAEALAQLTEMQGGADPYRVLFLDWQMPDLDGVSTLHKLQQALPQA 900

Query: 727  RVPLLMLLSPSRMRQEIARCKALGVGHYLGKPALADELWRSLQALLEPAVAGVPATVAEA 786
            + P +++++     +   + + LG+   L KP  A  L+  L +L++   A        A
Sbjct: 901  QWPRVVMVTAYDQEELRRQTENLGICGILVKPVSASTLFDVLVSLVDADNAPATPLHIAA 960

Query: 787  AGTPPAGLEVLLAEDHPVNQQLMRNMLERMGHRVTLARHGGEAVAAAARR---RFDLVLM 843
              T   G+ +LLAED+ +NQQ+   +L+ MG +VT+A  G +AV    R     FDLVLM
Sbjct: 961  PQTRIDGMRILLAEDNEINQQIAVELLQSMGAQVTVAGDGLQAVELLERSPDDSFDLVLM 1020

Query: 844  DMQMPEMGGEQATRLIRADEQARGLAPLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQ 903
            D+QMP + G  AT  +R  ++    A L I A++A A  E+R+R L  GM+ +L KP+  
Sbjct: 1021 DLQMPHLDGYDATERLRCQQR---FAHLPILAMTAHAMPEERERCLAIGMNDHLAKPI-- 1075

Query: 904  KDLQEVLAGLARPGQEEGGFDYGRMLEGAD-RDVLQIIGDV--FPGLARL---------- 950
             D   + A LAR  +E  G          D  D L  I  V    GLAR+          
Sbjct: 1076 -DPTALAATLARWYEERPGASAPAPTPAKDGTDALPPIPGVNTTQGLARMAGNQALYRRL 1134

Query: 951  ----------EMAAMEEALAAADWERLGRVAHSLRGAAANFGPSPLVQQATEVERLAPHQ 1000
                          + +ALA  D      +AH+L+G A N G   L Q+AT +++     
Sbjct: 1135 LLRFVDTQTGTGEHIRQALADGDITAAEHLAHTLKGVAGNIGAEVLQQKATALDQALRRN 1194

Query: 1001 AVQPAHLAELRLAL 1014
              Q   L  LR  L
Sbjct: 1195 DGQGQKLESLRQRL 1208



 Score = 26.9 bits (58), Expect = 0.010
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 22/117 (18%)

Query: 169 DVEGFIIEANDRFCEISGYSREELVGRNHRVVKSGIHPPAFYQE------------MWDT 216
           D EG  +  N  + +  G  R ++VG+  R +      P   +E            + D 
Sbjct: 459 DAEGRFLGCNRAYEDTFGVGRGQIVGKTVREL------PFLSEEEKQELQAVSEAIIRDG 512

Query: 217 IVHGRVWQGEVCNRSKDGRLYWVSATVVPFFDDLGVPYQYIAIRTDITARKLAEARL 273
           I+  R  Q    +  +   LYW +     F  + G P   + +  DI+ RKL E  L
Sbjct: 513 IMMHRELQLPFADGLRHDTLYWANG----FSREDGTPGGMVGVVVDISERKLMEEEL 565