Pairwise Alignments

Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  374 bits (960), Expect = e-107
 Identities = 259/651 (39%), Positives = 355/651 (54%), Gaps = 28/651 (4%)

Query: 389  ISERKRWEAEILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMTELALDTELTEEQR 448
            +  R+   A   +A++ AE AN+AK+ FLA MSHEIRTPMNGVIGMT L LDT+L  EQR
Sbjct: 232  LDNRETAMATARQAQQVAERANQAKAAFLATMSHEIRTPMNGVIGMTGLLLDTQLDPEQR 291

Query: 449  DYLEAVQMSANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADALRTVAVRADQKGL 508
             +   ++ SA +LL++I+DILDFSK+EAG+LD+E   F+L  +    +  +A RA  KG+
Sbjct: 292  HFATTIRDSAESLLTVINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPRAHAKGI 351

Query: 509  ELLARRGPGVPRRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAV-ELAEPGAAGQVLYF 567
            E+ +   P +P  + GDPGRLRQIL+NL GNAIKFT  G I + V +   P  AG+ L F
Sbjct: 352  EIASMVDPDLPAWVRGDPGRLRQILMNLAGNAIKFTSHGGISIEVRDETSPDGAGR-LRF 410

Query: 568  CVSDTGIGIAPEKQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCELMGGRIWVDSVPG 627
             V DTGIGI  +    +F  F Q D+ST RR+GGTGLGL I  RL E+MGG I V+S PG
Sbjct: 411  DVRDTGIGIPQDAIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVESTPG 470

Query: 628  QGSAFHFTLQLPTDGAAAPEPERRLSGKPALLLVVANARQRCRLQGLLASWGATVVAAAS 687
             GS F F+L       A P+    L+G+  +L+V  +   R  L+  L  +G  V + A 
Sbjct: 471  AGSLFWFSLPFQMVETAPPQ-RPDLAGR-RILVVDDSPINRDVLERQLRGFGVIVASCAD 528

Query: 688  GAEGLALLEQG-----QWDGVVADSRPVDGDAGDLLEHLARSPGRVPL-LMLLSPSRMRQ 741
                LA L +       W+  + D+R       DL+  +   P   P+ L++ S   +  
Sbjct: 529  AESALAELGRAAATGTPWEAAIIDARMPGVTGSDLIGRIRAEPVLAPMGLIIASSQGLSP 588

Query: 742  EIARCKALGVGHY-LGKPALADELWRSLQALLEPAVAGVPATVAEAAGTPPAGLEVLLAE 800
            E    KA    H  L +  +   L R L    +P +   P +  EA   P   L +L+AE
Sbjct: 589  EDGSPKADAFIHKPLRRQTILAVLARVLGLPHDPGLQDSPESEPEAIPRPARRLRILVAE 648

Query: 801  DHPVNQQLMRNMLERMGHRVTLARHGGEAVAAAARRRFDLVLMDMQMPEMGGEQATRLIR 860
            D+PVNQQ+   +L ++GH V +A  G EAV A   R +DLVLMD+QMPEM G QAT  IR
Sbjct: 649  DNPVNQQVAVGLLRKLGHSVDVAADGAEAVEAVRSRPYDLVLMDVQMPEMDGLQATAAIR 708

Query: 861  ADEQARGLAPLRIYALSAAARREDRQRGLVAGMDGYLLKPLQQKDLQEVLA------GLA 914
            A     G   + I A++A A R D +  L AGMD Y+ KP+ ++ L EVLA        A
Sbjct: 709  A--LTGGAERVPIVAMTANAMRGDDRMCLDAGMDRYISKPIDRRKLMEVLAQYAAEPPAA 766

Query: 915  RPGQEEGGFDYGRMLEGAD--------RDVLQIIGDVFPGLARLEMAAMEEALAAADWER 966
            +P Q E        ++  D          V++I+   F      E A    ALA  D ER
Sbjct: 767  KPPQAENPAPSAVEIDVLDLLCEDLGVETVVEILAKFFEDATSRE-AECAAALAREDHER 825

Query: 967  LGRVAHSLRGAAANFGPSPLVQQATEVERLAPHQAVQPAHLAELRLALEAL 1017
            + R AH+++GAAA+ G + + + A  +E      A   A LA L  A+  L
Sbjct: 826  VRREAHAIKGAAASLGLTDIRRTAEAMEAAVRSGAPIAAPLAALSDAIVRL 876