Pairwise Alignments

Query, 1026 a.a., PAS domain S-box from Dechlorosoma suillum PS

Subject, 1258 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  353 bits (907), Expect = e-101
 Identities = 267/689 (38%), Positives = 356/689 (51%), Gaps = 58/689 (8%)

Query: 376  DGSVRGLVGTIMDISERKRWEAEILRAKEAAENANRAKSDFLANMSHEIRTPMNGVIGMT 435
            DG+V G V T  DI+ERKR +A + +A + AE A++AK+DFLANMSHEIRTPMN +IGM+
Sbjct: 576  DGTVVGTVVTFRDITERKRADALLHQALDRAEAASQAKADFLANMSHEIRTPMNAIIGMS 635

Query: 436  ELALDTELTEEQRDYLEAVQMSANALLSIIDDILDFSKIEAGRLDVELIPFDLEKVCADA 495
             LAL TEL   QRDY+  +Q S   LL II+DILDFSKIEAG+L VE     L+ V  + 
Sbjct: 636  HLALKTELNPRQRDYVRKIQQSGQHLLGIINDILDFSKIEAGKLSVEKTAVHLDTVLDNV 695

Query: 496  LRTVAVRADQKGLELLARRGPGVPRRLLGDPGRLRQILLNLLGNAIKFTERGEIEVAVEL 555
               ++ +   KGLEL+      VP  ++GDP RL QIL+N   NA+KFTE GEI VAV L
Sbjct: 696  ANLISEKTIAKGLELIFDVASDVPNDMVGDPLRLGQILINYANNAVKFTETGEIVVAVRL 755

Query: 556  AEPGAAGQVLYFCVSDTGIGIAPEKQEHIFEAFAQEDSSTTRRFGGTGLGLTICSRLCEL 615
            AE       L F V DTGIG++ E+   +F++F Q D+STTR++GGTGLGL I  +L EL
Sbjct: 756  AEDLGEAVRLRFEVRDTGIGLSAEQMGRLFQSFQQADTSTTRKYGGTGLGLAISRKLAEL 815

Query: 616  MGGRIWVDSVPGQGSAFHFTLQLPTDGAAAPEPERRLSGKPAL-----LLVVANARQRCR 670
            M G + V+S PG+GS F FT  L         P R L  KP L     L+V  N   R  
Sbjct: 816  MDGEVGVESQPGRGSTFWFTACL-----GKGRPRRALVPKPDLRGRHMLVVDDNENARAV 870

Query: 671  LQGLLASWGATVVAAASGAEGLALLEQ----GQWDGVVADSRPVDGDAGDLLEHLARSPG 726
            L  +L S    V A  SGA  +A + +      ++ V  D +    D  +    +     
Sbjct: 871  LVDMLTSMSFRVEAVESGAAAVARVREVAGAKPFEVVFLDWQMPGMDGIETARAILGLGL 930

Query: 727  RVPLLMLLSPSRMRQEIAR-CKALGVGHYLGKPA----LADELWRSLQALLE--PAVAGV 779
              P  M++  +  R+E+ +  ++ G+   L KP     + D + R+L A LE  P  A  
Sbjct: 931  TSPPHMIMVTAHGREEVMKAAESAGIEDVLIKPVNPSIMFDAVMRALGAALEGDPEEAAA 990

Query: 780  PATVAEAAGTPPAGLEVLLAEDHPVNQQLMRNMLERMGHRVTLARHGGEAVAAAARRRFD 839
               V++ A     GL VLLAED+  NQQ+   +L   G  V +A +G  AV       +D
Sbjct: 991  GREVSDDALASLRGLRVLLAEDNDFNQQVATELLADGGVEVEVAENGKIAVDMVMAAPYD 1050

Query: 840  LVLMDMQMPEMGGEQATRLIRADEQARGLAPLRIYALSAAARREDRQRGLVAGMDGYLLK 899
            +VLMDMQMP M G  ATR IR      G   L + A++A A + DR R   AGM+ YL K
Sbjct: 1051 MVLMDMQMPVMDGVAATREIR----RLGFGDLPVIAMTANAMQADRDRCAAAGMNDYLTK 1106

Query: 900  PLQQKDLQEVL--------AGLARPGQEEGG-----------FDYGRM--LEGADRDVLQ 938
            P+   +L   L          +  P    G            FD+ RM  +   D   L+
Sbjct: 1107 PIDPDELFACLLKWRGVAPTAVVAPAAPAGAVPLLPEIDPDVFDFERMGPIYKWDMARLR 1166

Query: 939  IIGDVFPGLARLEMAAMEEALAAADWERLGRVAHSLRGAAANFGPSPLVQQATEVERLAP 998
             I   F   A  ++A +E   A  D   L  VAH L+G A   G   L + A +VE  A 
Sbjct: 1167 PILAAFLDDAGTKVARLE---AETDLAALREVAHGLKGTANTAGALRLGRLAADVENSAR 1223

Query: 999  HQ---------AVQPAHLAELRLALEALL 1018
                        + P  L+ELR AL  +L
Sbjct: 1224 DGNDAAAGMLIPLLPPTLSELRDALAPVL 1252