Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Dechlorosoma suillum PS

Subject, 640 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2

 Score =  313 bits (801), Expect = 2e-89
 Identities = 201/549 (36%), Positives = 284/549 (51%), Gaps = 14/549 (2%)

Query: 18  QAVQAQQRGDRHTAERHYRQILAVVPQHLDTAHNL--AILLGDQQRHADALALWQGVLAA 75
           +A +A  R D+  A   YR  L + P + ++  NL    L GD     +A AL +     
Sbjct: 95  EAFRALGRPDK--AREQYRLALTLNPAYPESLANLHRQPLPGD-----NAPALLERFCRL 147

Query: 76  LPGSIDARIEAAMTRIRMGDGAGAKADLVQAAALQPADDDTWRRIASGFVLLREFPDAVD 135
            P +    +  A +R+  G  A A+A    A AL+PA    +  + +     +    A  
Sbjct: 148 RPATASELLAVADSRLLAGRLADARAAYRAAVALEPATVQAYVNLGATASREKNHAQAAA 207

Query: 136 AYTAALNCNPQEPRNYTAFASLCSHLGEYGVAQELAESATRLAPDLLWAWVELGNAQMKQ 195
           AY  AL  +P  P  +   AS    L +   A      +  L PD    +  LG  Q  Q
Sbjct: 208 AYRRALRLSPDHPGAWNNLASAVWELNDGQGAVRFCRRSVALKPDHPDPYANLGYVQRSQ 267

Query: 196 GQA----AAAAASFSQAIRIAPQDPVGYCNLAITQMESMDLAAARLTLDQALALDPEHPL 251
            +     A AA    +A+R+ P       NL I  ++   L  A    ++ LA +P+HP 
Sbjct: 268 ARNGDDFAEAATLCRRALRVNPSHVSALNNLGIVNLDLGQLDEAERLFNRTLAAEPKHPD 327

Query: 252 ARWNRALVLLTLGQLREGWPDYEYRRQSNIQGVIYRPTTPQWRGEPIAGQRILLLCEQGL 311
           AR+N +L LL  G+L+EGW  YE R ++  Q          W+GEP+ G  ILL  EQG 
Sbjct: 328 ARFNLSLALLKAGRLKEGWDHYEARWETG-QLPTVNGQLRAWQGEPLNGATILLHAEQGH 386

Query: 312 GDSLQFIRYAALLKQRDAWIAVRIQRPLKPLFAELDCIDALIDESEAVPDTDWHCHLLSL 371
           GD+L F+RYA L+  +   + + +Q  LK L A +  + A+   ++  P  ++HC L+SL
Sbjct: 387 GDTLHFVRYAPLVAAQGGRVVLAVQPSLKRLVAGMPGVAAVHALTDPFPKPEFHCPLMSL 446

Query: 372 PLAFNTGLDDIPARMPYLRTPQVSAERWQQRLAELPRPRVGLVWAGGRRQHMADAVLLDA 431
           P    T L  IP  +PYL  P  +  +W  +       RVGLVW+G  R  +  A L D 
Sbjct: 447 PRLLGTELGTIPGAIPYLYPPAEAIGKWLGQPLPGAGLRVGLVWSGDPRPGLLRANLTDR 506

Query: 432 RRSLHLSQLLPLTQVPGISFVSLQKDEAAAQIAEVAGQWPILDYSGELSDFAETAALVEQ 491
           RRS+ L  L PL +VP + FV+LQ    AAQ+ E      I D  G ++DFA+TAALV +
Sbjct: 507 RRSMSLHDLAPLAEVPDLRFVNLQMGGPAAQLTEPPAGMDIHDPMGAITDFADTAALVMR 566

Query: 492 LDLVISVDTAVAHLAGALNKPVWLLNRWDTDWRWLLQRDDCPWYPSLRQFRQPGPGDWES 551
           LDLVI+VDT+VAHL GAL KPVW+++R+D  WRWL  RDD PWYP++R FRQ  PGDW +
Sbjct: 567 LDLVITVDTSVAHLVGALGKPVWVMSRYDGCWRWLQDRDDTPWYPTMRLFRQTAPGDWTT 626

Query: 552 AIAQLTAAL 560
            I ++  AL
Sbjct: 627 VIRRVADAL 635



 Score = 35.0 bits (79), Expect = 9e-06
 Identities = 24/79 (30%), Positives = 37/79 (46%)

Query: 16  FAQAVQAQQRGDRHTAERHYRQILAVVPQHLDTAHNLAILLGDQQRHADALALWQGVLAA 75
           + Q  QA+   D   A    R+ L V P H+   +NL I+  D  +  +A  L+   LAA
Sbjct: 262 YVQRSQARNGDDFAEAATLCRRALRVNPSHVSALNNLGIVNLDLGQLDEAERLFNRTLAA 321

Query: 76  LPGSIDARIEAAMTRIRMG 94
            P   DAR   ++  ++ G
Sbjct: 322 EPKHPDARFNLSLALLKAG 340



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 17/54 (31%), Positives = 25/54 (46%)

Query: 3   QALPQTPEALSACFAQAVQAQQRGDRHTAERHYRQILAVVPQHLDTAHNLAILL 56
           +AL   P  +SA     +     G    AER + + LA  P+H D   NL++ L
Sbjct: 283 RALRVNPSHVSALNNLGIVNLDLGQLDEAERLFNRTLAAEPKHPDARFNLSLAL 336