Pairwise Alignments

Query, 556 a.a., Tfp pilus assembly protein PilF from Dechlorosoma suillum PS

Subject, 491 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  231 bits (588), Expect = 6e-65
 Identities = 161/465 (34%), Positives = 225/465 (48%), Gaps = 24/465 (5%)

Query: 101 LEPGNALAYDNLGQIFRQLGQYEGAELSLRNALLLAPDTPNLHNNLGLILLDQNKLAEAE 160
           L P + + +  LG   R LG+ E A  +L  AL L P  P+   +L  + L++ +   A 
Sbjct: 35  LRPEHPVVWFLLGVTLRTLGRAEEAVAALHVALRLQPGHPDTLFHLASVHLERRRPECAL 94

Query: 161 QAFLQALRLAPQHADAMTNLSTVLQAQGRTAEALEHCRRAAALAPRSAVTWTNLGNVLKS 220
            A  + + L P H  A   L + L A      A    R AA L P  A    N+G  + +
Sbjct: 95  PALRRLIALRPGHEGAAFALGSALMALDDPEAAERAFRLAALLQPDGAAVNNNVGAAILA 154

Query: 221 MGLHQEALEAQRQAIALAPDYALAHWNYAMSLLALGQLEAGWQEYEW--GAAAGTRTRFA 278
                 AL   R+A+ + P +     N  ++ L  G+LE G+++YEW  G A     R  
Sbjct: 155 QRRPGAALGHFRRAVRIDPSWPEHRKNLGVAQLMRGELEEGFRDYEWRTGQAVWQWNRSF 214

Query: 279 ATLPRWQGEDLAGKHLLLRAEQGLGDTLQFVRFAPELQRRGAKVTLECQPSLIPLLQGVA 338
              P W G  LAG+ +L+  EQGLGD++QFVR+ P L+ RGA+   ECQP L  LL    
Sbjct: 215 PGKPLWDGGPLAGRTILVHYEQGLGDSVQFVRYFPLLKARGARTVFECQPLLKQLLATAP 274

Query: 339 GIDHLVAQTGELPADAWGCQCYLPLMSLPHLLHIGLADLPGPIPYLPLEAGRVRHWQDML 398
           GID LVA+   LP       C L LMSLPH        +P  IPYL  +  R   W++ +
Sbjct: 275 GIDMLVARGETLP----DFDCCLSLMSLPHRCGTRADTIPQGIPYLRTDPERAAFWRERV 330

Query: 399 GPRSR---FRVGLAWAGNPRHRNDHQRSCPLAQFVELLAVPGVEFISLQLPAA--ELPQ- 452
              +R    RVG+ W  +        RS PL  F  L  VPG+   SLQ      EL + 
Sbjct: 331 LGHARPGELRVGVQWRAD-----GDDRSIPLDCFEALSQVPGLRLFSLQQAVGLDELERL 385

Query: 453 ----GLRDVTA---GIRDFADTAAIVSQLDLVISVDTAIIHLAGALGRPAWLLLPRDADW 505
               G+ D+     G   F DTAA+   +DLV+  D+ + H+AG LGRP +L+LP   DW
Sbjct: 386 GARFGIVDLPGRRPGAEGFLDTAALAEAMDLVVVCDSVVGHVAGVLGRPVFLVLPWLGDW 445

Query: 506 RWLQERQDSPWYPSLKLYRQKMPGQWLPVLQSVRRDLESLAGNAR 550
           RW++    +PWYP+ +L+R   P  W  V+  V   +      AR
Sbjct: 446 RWMKHPDCTPWYPAHRLFRMARPNDWHGVMLRVAEAVADEVRRAR 490



 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 59/186 (31%), Positives = 84/186 (45%)

Query: 7   LLQQGQQRFSQGDMAGAEQAFAAAAQLAPQAWQVHFNLGMCRDRLGRREAAFTAYEKAYQ 66
           +  +G  R  + ++  A  +F AAA L P+   V F LG+    LGR E A  A   A +
Sbjct: 9   VFNRGLLRVERSELPEAATSFQAAAVLRPEHPVVWFLLGVTLRTLGRAEEAVAALHVALR 68

Query: 67  LAPDHVPCITNLAVNAFNLGKTEMALQLTLRQVELEPGNALAYDNLGQIFRQLGQYEGAE 126
           L P H   + +LA       + E AL    R + L PG+  A   LG     L   E AE
Sbjct: 69  LQPGHPDTLFHLASVHLERRRPECALPALRRLIALRPGHEGAAFALGSALMALDDPEAAE 128

Query: 127 LSLRNALLLAPDTPNLHNNLGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQA 186
            + R A LL PD   ++NN+G  +L Q +   A   F +A+R+ P   +   NL      
Sbjct: 129 RAFRLAALLQPDGAAVNNNVGAAILAQRRPGAALGHFRRAVRIDPSWPEHRKNLGVAQLM 188

Query: 187 QGRTAE 192
           +G   E
Sbjct: 189 RGELEE 194



 Score = 48.9 bits (115), Expect = 5e-10
 Identities = 38/125 (30%), Positives = 58/125 (46%)

Query: 145 NLGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQGRTAEALEHCRRAAALA 204
           N GL+ +++++L EA  +F  A  L P+H      L   L+  GR  EA+     A  L 
Sbjct: 11  NRGLLRVERSELPEAATSFQAAAVLRPEHPVVWFLLGVTLRTLGRAEEAVAALHVALRLQ 70

Query: 205 PRSAVTWTNLGNVLKSMGLHQEALEAQRQAIALAPDYALAHWNYAMSLLALGQLEAGWQE 264
           P    T  +L +V       + AL A R+ IAL P +  A +    +L+AL   EA  + 
Sbjct: 71  PGHPDTLFHLASVHLERRRPECALPALRRLIALRPGHEGAAFALGSALMALDDPEAAERA 130

Query: 265 YEWGA 269
           +   A
Sbjct: 131 FRLAA 135