Pairwise Alignments
Query, 625 a.a., putative O-linked N-acetylglucosamine transferase, SPINDLY family from Dechlorosoma suillum PS
Subject, 2380 a.a., Photosystem I assembly protein Ycf3 from Methylophilus sp. DMC18
Score = 189 bits (479), Expect = 2e-51
Identities = 150/541 (27%), Positives = 238/541 (43%), Gaps = 49/541 (9%)
Query: 90 EALQAYDKALEVRPDYTEVLINSGALLRELMRHQEALERFNRVLTYDPNHQLALGNCGIL 149
++L+ Y+KAL+++PD N LR + + A + + + DP + + N G
Sbjct: 346 QSLEYYEKALQLKPDCAAFWSNYSVSLRLVGEVERARQALEKAIALDPEYLDSYINLGSA 405
Query: 150 LTEFKRSTEAVGMFQRLLAINPNYDYGYGLLSYERLHACDWTDFAALREAIVAGVRAGRR 209
E AV + +L+A P+ D Y L Y A +
Sbjct: 406 YLEQGDVKLAVETYVKLIARAPHLDKAYRNLLYTNSFANEL------------------- 446
Query: 210 ACKSLAFMALSDSAEDHQRCARTFSQHHYPKAEPL--WRGERYRHERIRVAYVSPDLREH 267
S ++H + AR + KA P W + +R+R+ VS DLR H
Sbjct: 447 ------------SPKEHLKYARACGEQFMAKAAPFKNWLVNA-QDQRLRIGLVSADLRSH 493
Query: 268 PVGHLIAGVLERHDKSRFETVAISLGINDQSRLRGRMEKAFDHFIDAKQMGTRKIAELMR 327
PVG+ + L+ D + E A S + + + ++K + M + A L+R
Sbjct: 494 PVGYFLEHWLKHIDAGKTEIYAYSADGREDNYSQV-LKKHCTQWRSLAGMNDARAASLIR 552
Query: 328 EMEIDIAVDLAGFTADSRTDVFAYRPAPVQVNYLGYPGTLGLDYMDYILADRFVIPPEHQ 387
E I I +DL+G+TADSR +FA+RPAPVQ ++LGY T GL MD ++AD +P +
Sbjct: 553 EDGIHILLDLSGYTADSRVSLFAWRPAPVQASWLGYWDTTGLPTMDAVIADPVSVPAGSE 612
Query: 388 CFYDEKVVYLPDAYL---PTDSGVKISERTPSRSECGLPEQGVVFCSFSHDYKVSPPVFD 444
+ E VV LP L DS +++ L V F F KVS V
Sbjct: 613 GQFTESVVKLPHTRLCFSAPDSNEQVNALP------ALQNGYVTFGCFQKYSKVSDEVLA 666
Query: 445 IWMNLLRQVPGSVLW---LVSRNEVSQGNLRKEAQARGVDPSRLVFAGRVPLVEDHLARY 501
+W + +P + L+ +++ Q Q G+ P + V R + + Y
Sbjct: 667 VWAQVFLALPEAKLYWQCKAFQDDQIQAEALARLQQAGIQPEQCVLM-RPTARDAYFKNY 725
Query: 502 RQADIFLDTHPYNAHTTAADALMAGLPVVTYMGNAFPARVAGSLVHAVGLPELATKSLAE 561
D+ LD+ P+N TT +AL G+P +T G +R S++ + GLPE +
Sbjct: 726 HAVDMILDSFPFNGGTTTCEALWMGVPTLTMPGETMISRQGASMMTSAGLPEWVAEDKKA 785
Query: 562 YEALALALATDPARLAALKARLQANLATQPLFDTDAFCRNLEAAYIAMWRRSQLGGAEDA 621
+ A+ A D LA L+A L+A + PL D + F R++E +W ++ G DA
Sbjct: 786 FVQKAIQFAADLPALANLRAGLRAQVMRSPLMDGERFARDMEQLLWNVW-SERVTGVADA 844
Query: 622 L 622
L
Sbjct: 845 L 845
Score = 152 bits (383), Expect = 2e-40
Identities = 141/549 (25%), Positives = 232/549 (42%), Gaps = 43/549 (7%)
Query: 69 PQFAPLWFVLGAVRQALGQKEEALQAYDKALEVRPDYTEVLINSGALLRELMRHQEALER 128
PQ+ W +L V QK++A A +AL + + G +L+ A
Sbjct: 1268 PQWLAGWKMLADVLML--QKKDASAAAKQALTLNAQDPQEHCYYGIVLKAKGDLPGAATA 1325
Query: 129 FNRVLTYDPNHQLALGNCGILLTEFKRSTEAVGMFQRLLAINPNYDYGYGLLSYERLHAC 188
F + + ++ A N G +L + + A+ F+ LA+ PNY + L + HA
Sbjct: 1326 FQQAIALKSDYAAAYNNLGTVLKDLGQVETAIEHFKCALALQPNYADCFSNLLFCMTHA- 1384
Query: 189 DWTDFAALREAIVAGVRAGRRACKSLAFMALSDSAEDHQRCARTFSQHHYPKAEPLWRGE 248
+ D AAL +A +A L L + HQ
Sbjct: 1385 EHIDNAALMQA--------HQAYADLYEAPLKAAWLPHQNT------------------- 1417
Query: 249 RYRHERIRVAYVSPDLREHPVGHLIAGVLERHDKSRFETVAISLGINDQSRLRGRMEKAF 308
R H + + +VS D R H V H + +L K + + +M+ F
Sbjct: 1418 RDVHRPLNIGWVSADFRAHSVAHFMLPLLNELAKETSLRLVAYANQPLVDNVTTQMQGYF 1477
Query: 309 DHFIDAKQMGTRKIAELMREMEIDIAVDLAGFTADSRTDVFAYRPAPVQVNYLGYPGTLG 368
+ + + +AE +R+ IDI +DL+G T+ +R FA +PAPVQV++LGY T G
Sbjct: 1478 STWYEVSSWSDQALAEQIRDDGIDILIDLSGHTSGNRLLTFARKPAPVQVSWLGYLNTTG 1537
Query: 369 LDYMDYILADRFVIPP-EHQCFYDEKVVYLP--DAYLPTDSGVKISERTPSRSECGLPEQ 425
L MDY LAD +++P + + EK+V LP ++P + +++ L
Sbjct: 1538 LSSMDYYLADPYLLPAGQFDDQFTEKLVQLPVNATFIPYEQAPEVNALP------ALNNG 1591
Query: 426 GVVFCSFSHDYKVSPPVFDIWMNLLRQVPGS--VLWLVSRNEVSQGNLRKEAQARGVDPS 483
V F F+ K++ W L++ +P S V+ V E +Q +L+ G+ +
Sbjct: 1592 YVTFACFNRVLKITQATVQQWAALMQALPDSRLVIGGVGEGESTQ-HLQTWFAEAGIAAN 1650
Query: 484 RLVFAGRVPLVEDHLARYRQADIFLDTHPYNAHTTAADALMAGLPVVTYMGNAFPARVAG 543
R+ + R + +L Y + DI LDT P N TT A AL G+P + G+ +R A
Sbjct: 1651 RIRYYARTDMA-SYLGYYHEVDICLDTFPSNGVTTTAHALWMGVPTLCVAGDRLASRGAM 1709
Query: 544 SLVHAVGLPELATKSLAEYEALALALATDPARLAALKARLQANLATQPLFDTDAFCRNLE 603
+L+ +GL + L L D +LAA +A ++ + + L L
Sbjct: 1710 ALMQHLGLMQFIASDHDSLIKQTLDLCADFTKLAACRAHMREHFSNSLLAKPGLQAEALR 1769
Query: 604 AAYIAMWRR 612
MW+R
Sbjct: 1770 QMLFQMWQR 1778
Score = 58.5 bits (140), Expect = 3e-12
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 14 LQNQGRLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEHGVAVAPQFAP 73
L+ G+ EA L LQ N +DA L+ + +L + GK+ +A+ + + P A
Sbjct: 134 LKEAGQQKEAEKLLRTALQLNKHDALVLFDLAALLHESGKSLEAVQYYRQALEIEPDNAV 193
Query: 74 LWFVLGAVRQALGQKEEALQAYDKALEVRPDYTEVLINSGALLRELMRHQEALERFNRVL 133
L + + V LG +EAL + +A+++ Y + L G LR+ R +EA + + +
Sbjct: 194 LAYNMAQVLFVLGNLDEALVHFQRAIDLNQTYFDALHQYGHCLRQKNRFKEAEQVWLQAR 253
Query: 134 TYDPNHQLALGNCGILLTEFKRSTE 158
+P L + L + ++ E
Sbjct: 254 VLNPESWQLLNDLAQLYKQLQQPLE 278
Score = 54.3 bits (129), Expect = 6e-11
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 7 LLIQAIELQNQGRLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEHGVA 66
LL Q +L QG + ++ P + A +G +L ++G A L V
Sbjct: 25 LLQQLAQLWQQGATEACFSIARQLTSEFPKEGIAWKILGGLLQQRGDLQGAGEALAQAVK 84
Query: 67 VAPQFAPLWFVLGAVRQALGQKEEALQAYDKALEVRPDYTEVLINSGALLRELMRHQEAL 126
+ + A ++ V LG A + Y +A+ + P T N +LL+E + +EA
Sbjct: 85 LLKKDAEVFLNAANVAAQLGDVTLATKHYRQAIRLNPSMTRAYANLASLLKEAGQQKEAE 144
Query: 127 ERFNRVLTYDPNHQLALGNCGILLTEFKRSTEAVGMFQRLLAINPN 172
+ L + + L L + LL E +S EAV +++ L I P+
Sbjct: 145 KLLRTALQLNKHDALVLFDLAALLHESGKSLEAVQYYRQALEIEPD 190
Score = 52.4 bits (124), Expect = 2e-10
Identities = 39/138 (28%), Positives = 64/138 (46%)
Query: 34 NPNDAAALYSVGVILLKQGKAAQAIPLLEHGVAVAPQFAPLWFVLGAVRQALGQKEEALQ 93
NP+ A ++ +L + G+ +A LL + + A + F L A+ G+ EA+Q
Sbjct: 120 NPSMTRAYANLASLLKEAGQQKEAEKLLRTALQLNKHDALVLFDLAALLHESGKSLEAVQ 179
Query: 94 AYDKALEVRPDYTEVLINSGALLRELMRHQEALERFNRVLTYDPNHQLALGNCGILLTEF 153
Y +ALE+ PD + N +L L EAL F R + + + AL G L +
Sbjct: 180 YYRQALEIEPDNAVLAYNMAQVLFVLGNLDEALVHFQRAIDLNQTYFDALHQYGHCLRQK 239
Query: 154 KRSTEAVGMFQRLLAINP 171
R EA ++ + +NP
Sbjct: 240 NRFKEAEQVWLQARVLNP 257
Score = 47.4 bits (111), Expect = 7e-09
Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 27/245 (11%)
Query: 14 LQNQGRLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEHGVAVAPQFAP 73
LQ +G L A ++ DA + + + G A + + P
Sbjct: 66 LQQRGDLQGAGEALAQAVKLLKKDAEVFLNAANVAAQLGDVTLATKHYRQAIRLNPSMTR 125
Query: 74 LWFVLGAVRQALGQKEEALQAYDKALEVRPDYTEVLINSGALLRELMRHQEALERFNRVL 133
+ L ++ + GQ++EA + AL++ VL + ALL E + EA++ + + L
Sbjct: 126 AYANLASLLKEAGQQKEAEKLLRTALQLNKHDALVLFDLAALLHESGKSLEAVQYYRQAL 185
Query: 134 TYDPNHQLALGNCGILLTEFKRSTEAVGMFQRLLAINPNY-----DYGYGLLSYERLHAC 188
+P++ + N +L EA+ FQR + +N Y YG+ L R
Sbjct: 186 EIEPDNAVLAYNMAQVLFVLGNLDEALVHFQRAIDLNQTYFDALHQYGHCLRQKNR---- 241
Query: 189 DWTDFAALREAIVAGVRAGRRACKSLAFMALSDSAE---------DHQRCARTFSQHHYP 239
+EA ++A R ++ L+D A+ +++ CA+ Q P
Sbjct: 242 -------FKEAEQVWLQA--RVLNPESWQLLNDLAQLYKQLQQPLEYEACAKAIMQVKAP 292
Query: 240 KAEPL 244
+ E L
Sbjct: 293 EIEEL 297
Score = 46.6 bits (109), Expect = 1e-08
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 5/155 (3%)
Query: 8 LIQAIELQNQGRLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEHGVAV 67
L+ A E Q G++++AL + L P A + +L+ Q K A A + + +
Sbjct: 1244 LLTAFEQQQYGQMEQALHTY---LGQYPQWLAGWKMLADVLMLQKKDASAAA--KQALTL 1298
Query: 68 APQFAPLWFVLGAVRQALGQKEEALQAYDKALEVRPDYTEVLINSGALLRELMRHQEALE 127
Q G V +A G A A+ +A+ ++ DY N G +L++L + + A+E
Sbjct: 1299 NAQDPQEHCYYGIVLKAKGDLPGAATAFQQAIALKSDYAAAYNNLGTVLKDLGQVETAIE 1358
Query: 128 RFNRVLTYDPNHQLALGNCGILLTEFKRSTEAVGM 162
F L PN+ N +T + A M
Sbjct: 1359 HFKCALALQPNYADCFSNLLFCMTHAEHIDNAALM 1393
Score = 44.3 bits (103), Expect = 6e-08
Identities = 32/132 (24%), Positives = 59/132 (44%)
Query: 14 LQNQGRLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEHGVAVAPQFAP 73
L NQ L EA + D ++ ++L + + AQ++ E + + P A
Sbjct: 304 LINQQLLTEAERYCKQAMSLGIEDPFTYCNMALLLYYKQEYAQSLEYYEKALQLKPDCAA 363
Query: 74 LWFVLGAVRQALGQKEEALQAYDKALEVRPDYTEVLINSGALLRELMRHQEALERFNRVL 133
W + +G+ E A QA +KA+ + P+Y + IN G+ E + A+E + +++
Sbjct: 364 FWSNYSVSLRLVGEVERARQALEKAIALDPEYLDSYINLGSAYLEQGDVKLAVETYVKLI 423
Query: 134 TYDPNHQLALGN 145
P+ A N
Sbjct: 424 ARAPHLDKAYRN 435
Score = 42.0 bits (97), Expect = 3e-07
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 39 AALYSVGVILLKQGKAAQ---AIPLLEHGVAVAPQFAPLWFVLGAVRQALGQKEEALQAY 95
AAL V + L+ +A A L + +AVAPQ AP WF LG + A G ++EA+ +
Sbjct: 1099 AALEEVFTLALQHQQAGDLQTATQLYQEILAVAPQSAPAWFNLGLIAWAQGHQQEAVACF 1158
Query: 96 DKALEVRPDYTEVL 109
+A +P E L
Sbjct: 1159 AQAHAAQPAEWEYL 1172
Score = 33.1 bits (74), Expect = 1e-04
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 4 PNTLLIQAIELQNQGRLDEALALFNICLQNNPNDAAALYSVGVILLKQGKAAQAIPLLEH 63
P T A+ L + ++L + LQ P+ AA + V L G+ +A LE
Sbjct: 328 PFTYCNMALLLYYKQEYAQSLEYYEKALQLKPDCAAFWSNYSVSLRLVGEVERARQALEK 387
Query: 64 GVAVAPQFAPLWFVLGAVRQALGQKEEALQAYDKALEVRP 103
+A+ P++ + LG+ G + A++ Y K + P
Sbjct: 388 AIALDPEYLDSYINLGSAYLEQGDVKLAVETYVKLIARAP 427
Score = 27.3 bits (59), Expect = 0.008
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 51 QGKAAQAIPLL-EHGVAVAPQFAPLWFVLGAVRQALGQKEEALQAYDKALEVRPDYTEVL 109
+G+AA P+ E G A+ F L Q G + A Q Y + L V P
Sbjct: 1084 EGEAAVGTPMTAELGAALEEVFT-----LALQHQQAGDLQTATQLYQEILAVAPQSAPAW 1138
Query: 110 INSGALLRELMRHQEALERFNRVLTYDP 137
N G + QEA+ F + P
Sbjct: 1139 FNLGLIAWAQGHQQEAVACFAQAHAAQP 1166