Pairwise Alignments

Query, 267 a.a., ABC-type Co2+ transport system, periplasmic component from Dechlorosoma suillum PS

Subject, 310 a.a., Nikel transport family protein NikM from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  259 bits (662), Expect = 5e-74
 Identities = 132/237 (55%), Positives = 169/237 (71%), Gaps = 3/237 (1%)

Query: 5   RPLTIAALLATALVPAAQAHNAWLLPSSTVLSKAQ-WITVDAAVANDLFFFNHNALNLDN 63
           R LT+AA  A AL  A  AH +WLLPS T+ S  Q W++VDAAV+ND+F++ HNA  LDN
Sbjct: 9   RVLTLAAAAALALPAAVHAHRSWLLPSGTIYSGQQPWVSVDAAVSNDIFYYEHNAAGLDN 68

Query: 64  LTVTAPDGSKVAPENLAKGKLRSVFDLNLTQAGTYRVAVVNAGIMASFKLKGEPKRWRGS 123
           L V  PDG  V  EN AKG+ RS+FD+ L + GTYR+A+VN  I+ASFK+  E KR RG+
Sbjct: 69  LVVIGPDGQPVQAENQAKGRYRSMFDVKLEKQGTYRLALVNDAIIASFKVGTESKRLRGT 128

Query: 124 AEAFAREIPAEAEELNVNEMAGRNETFVTVGKPS--ALAPIGKGLELVPVTHPNDLVNGE 181
           AE+ A+EIPA AE+L V++   R ETFVT GKP+  AL P G+G+ELVPVTHPNDLV G+
Sbjct: 129 AESLAKEIPANAEDLRVSQSQNRVETFVTSGKPTTDALKPTGRGIELVPVTHPNDLVEGD 188

Query: 182 AATFQMLLDGKPAAGLEVTVTKGATRYRNQLGEMKLKTGADGKFSVTFPEAGMYWLD 238
            ATF+ L +GKPAAG   TV     RYR++LGE++  T   G+  V +P AGMYW++
Sbjct: 189 TATFRFLDNGKPAAGYAATVILAGLRYRSELGEIRTTTDDKGEIKVKWPAAGMYWVN 245