Pairwise Alignments

Query, 386 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Dechlorosoma suillum PS

Subject, 656 a.a., MacB family efflux pump subunit from Pseudomonas fluorescens SBW25

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 102/403 (25%), Positives = 158/403 (39%), Gaps = 60/403 (14%)

Query: 16  HKLRTLLTLVGLMVAVLSFGLLSTVVDAW------YAGAEGAS---------NAR----L 56
           ++ RT LTL+G+++ V S  ++  V +          GA G++         N R    +
Sbjct: 279 NRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYLSGSSPNPRTPLGI 338

Query: 57  VTRNSISLVFPLPLTYKQKIRQIDGVKA---ITTANWFGGIYKEPKNFFPQFAVDPNYLE 113
           VT N +  +  LP    Q+I  ++G +A       ++   +     NF   F    N+  
Sbjct: 339 VTLNDVHALAALPQV--QRIMPVNGSEAGVRFGNVDYMAYVGGNDTNFPAIF----NWPV 392

Query: 114 LYPEYLLSDDERTAFARDRKGAVVGRKLAAQYGFKVGDVVQLKGTIFPGTWEFVIRGIYT 173
           +   Y  + DER A      G  V  KL       +G  + ++   F        +G  +
Sbjct: 393 VEGNYFTAADERAAATVAVIGHRVREKLFKGEVDPIGQYILIENVPFQVIGVLAEKGASS 452

Query: 174 GRDAKTDVAQMLFHWDYLNEVAKVRYPRRQNQVGVYVVTIDDPG-RAAELS--RLI---- 226
           G     D   + +        A VR     N   V +   D    R AEL+  +L+    
Sbjct: 453 GNKDSDDRIAIPY------TAASVRLFGSYNPEYVVIAAADARKVREAELAIDQLMQTLH 506

Query: 227 ----DAEFRNSAAETLTETEKAFQLSFVSMTEAIVVAIRIVSYVVIAIILAVMANTMAMT 282
               D E  N+AA    E      LS +      + +I  +S +V  I   VM N M MT
Sbjct: 507 NGKRDYELTNNAAMIQAEARTQNTLSLM------LGSIAAISLLVGGI--GVM-NIMLMT 557

Query: 283 VRERTSEYATLKALGFGPGFVQGLIFGESVAIAAIGGGLGIALTFPAAAAFAQA-MGTLF 341
           VRERT E     A G     +      E+V ++ +GG  GIAL          A +   F
Sbjct: 558 VRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLCGIALALLVGGVLVLAKVAVQF 617

Query: 342 PIFFVSGTTVLLQAACALGVGLIAAWFPSRRAARIPIVEGLRS 384
            +  V G        CAL  G++  + P+R+AAR+  V+ L S
Sbjct: 618 SLVAVMGAF-----GCALVTGVVFGFMPARKAARLDPVKALTS 655