Pairwise Alignments

Query, 386 a.a., ABC-type transport system, involved in lipoprotein release, permease component from Dechlorosoma suillum PS

Subject, 648 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 48/184 (26%), Positives = 88/184 (47%), Gaps = 7/184 (3%)

Query: 202 RQNQVGVYVVTIDD--PGRA-AELSRLIDAEFRNSAAETLTETEKAFQLSFVSMTEAIVV 258
           R N  G+ V   DD  PG   A ++RLI  E R+ A +         + +  + T+ + +
Sbjct: 466 RPNVDGITVRIRDDVDPGNVEAAVTRLI--ERRHGAKDFFLTNSATIRETIETTTQTLTL 523

Query: 259 AIRIVSYVVIAIILAVMANTMAMTVRERTSEYATLKALGFGPGFVQGLIFGESVAIAAIG 318
            I  V+ + + +    + N M ++V ERT E     A+G     +      E+V +  +G
Sbjct: 524 LISSVAVISLIVGGIGVMNIMLVSVTERTKEIGVRVAVGARRSDILSQFLIEAVMVCLVG 583

Query: 319 GGLGIALTFPAAAAFAQAMGTLFPIFFVSGTTVLLQAACALGVGLIAAWFPSRRAARIPI 378
           G +GI L    +A F   +   F + F  G ++++  AC+  +G++  + P+R AA++  
Sbjct: 584 GLMGIMLALGISALF-NLLSPDFKMIFSPG-SIIVAFACSTLIGIVFGFLPARNAAKLDP 641

Query: 379 VEGL 382
           +E L
Sbjct: 642 IEAL 645



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 9/25 (36%), Positives = 19/25 (76%)

Query: 16  HKLRTLLTLVGLMVAVLSFGLLSTV 40
           HK+R+LLT++G+++ + S   +S +
Sbjct: 268 HKMRSLLTMLGIIIGIASVAAISAL 292